PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_022772932.1

Organism

Durio zibethinus

Taxonomic ID

66656

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Malvales; Malvaceae; Helicteroideae; Durio

Family

bHLH

Protein Properties

Length: 429aa MW: 46853.1 Da PI: 6.7388

Description

bHLH family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_022772932.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	HLH	31	4.6e-10	269	317	3	55
HHHHHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHHH CS HLH 3 rahnerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksLq 55 +h+ +Er RR++i +++ L+el+P + sk Ka +L + ++Y++sLq XP_022772932.1 269 NSHSLAERVRREKISERMRLLQELVPGC----SKITGKAVMLDEIINYVQSLQ 317 58************************....899***************9 PP

Sequence ? help Back to Top
Protein Sequence Length: 429 aa Download sequence
MSTGDNDDVG FKHRRQSLMN CPPSQMNTNH LSDKVDGSMN SISKAPDPFF GSGWDPIVSL 60 SQSEGLGGSS MVSHTEFANS HYPLLMEDQG ISGTSHFSQI QSNPSFVELV PKLSDFGSGN 120 LSEMVGPFSL PQCSQIANSR CPPNYALNPK VGNERASTNC TQSLGEHQIS EERAVGTPPN 180 GKSRKRALES NSQLRSYQNA DEEPRKDPSR EGCDVPKEQD GKKQKSEQNA GANSRGKQVA 240 KQAKDSSQTG EAHKENYVHV RARRGQATNS HSLAERVRRE KISERMRLLQ ELVPGCSKIT 300 GKAVMLDEII NYVQSLQQQV EFLSMKLATV NPELNLDLER ILSEEILHSR GESAAAVLGF 360 RPGINSSHSF SPGIFQGTMS GIPSTNPQFS PLPQTVLDNE LQNLFQMGFY SSSAMDSLGP 420 NAGRLKSEL

Sequence ? help Back to Top

Protein Sequence Length: 429 aa Download sequence

MSTGDNDDVG FKHRRQSLMN CPPSQMNTNH LSDKVDGSMN SISKAPDPFF GSGWDPIVSL  60
SQSEGLGGSS MVSHTEFANS HYPLLMEDQG ISGTSHFSQI QSNPSFVELV PKLSDFGSGN  120
LSEMVGPFSL PQCSQIANSR CPPNYALNPK VGNERASTNC TQSLGEHQIS EERAVGTPPN  180
GKSRKRALES NSQLRSYQNA DEEPRKDPSR EGCDVPKEQD GKKQKSEQNA GANSRGKQVA  240
KQAKDSSQTG EAHKENYVHV RARRGQATNS HSLAERVRRE KISERMRLLQ ELVPGCSKIT  300
GKAVMLDEII NYVQSLQQQV EFLSMKLATV NPELNLDLER ILSEEILHSR GESAAAVLGF  360
RPGINSSHSF SPGIFQGTMS GIPSTNPQFS PLPQTVLDNE LQNLFQMGFY SSSAMDSLGP  420
NAGRLKSEL

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G10120.1	1e-88	bHLH family protein