PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_022772395.1
Organism
Durio zibethinus
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Malvales; Malvaceae; Helicteroideae; Durio
Family GRAS
Protein Properties Length: 464aa    MW: 53278.2 Da    PI: 6.7316
Description GRAS family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_022772395.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1GRAS312.87.7e-96794621374
            GRAS   1 lvelLlecAeavssgdlelaqalLarlselaspdgdpmqRlaayfteALaarlarsvselykalppsetseknsseelaalklfsevsPilkfsh 95 
                     l++lLl +A+ v++++ + a + L +l + +s  gd++qR++ayf+ +Laarl+   s  ++ +  ++t+    +ee+ a++ ++ vsP+++f+h
  XP_022772395.1  79 LIHLLLIAATSVDNNNVNPALENLIQLYQSVSLMGDSVQRVVAYFADGLAARLLTRKSPFCDMIMKEPTA----EEEFLAFTCLYRVSPYYQFAH 169
                     689****************************************************899999888777775....78889999************* PP

            GRAS  96 ltaNqaIleavege.....ervHiiDfdisqGlQWpaLlqaLasRpegpp..slRiTgvgspesgskeeleetgerLakfAeel.gvpfefnvlv 182
                     +taNqaI ea+e+e     +++H+iDfd+s+G+QWp+L+q+L++++++    slR+Tg g+    s eel+et+ rL +fAee+ ++ fef+ l 
  XP_022772395.1 170 FTANQAIIEAFEKEeeinnRALHVIDFDVSYGFQWPSLIQSLSDKASNCKriSLRLTGYGR----SLEELQETQTRLVSFAEEFrNLVFEFQGL- 259
                     *************955554555***********************96543359********....9*****************857*******8. PP

            GRAS 183 akrledleleeLrvkpgEalaVnlvlqlhrlldesvsleserdevLklvkslsPkvvvvveqeadhnsesFlerflealeyysalfdsleaklpr 277
                       r  +++l +Lr k++E+++Vn+v +l +l  + ++++    e+Lk v sl+P +v++veqe +++  sFl rf+e+l+y++a+fdsl+  lp 
  XP_022772395.1 260 -LRGPMIKLINLRKKKNETVVVNFVSHLNTLN-NFLKIS----ETLKSVHSLRPSIVILVEQEGSRSPRSFLSRFMESLHYFAAMFDSLDDCLPL 348
                     .78899999******************99996.555555....5*************************************************** PP

            GRAS 278 eseerikvErellgreivnvvacegae...rrerhetlekWrerleeaGFkpvplsekaakqaklllrkvk..s.....dg.....yrveee.sg 356
                     es er ++E+  lg+ei+ +v c ++e   +  r e++e+W++r+e+ GF++++ls+k   qakll++     s     +g     +rv e+ +g
  XP_022772395.1 349 ESAERLSIEKNHLGKEIKTMVNCDKDEetkSCTRYEKMETWKSRMESHGFEEMKLSSKCLIQAKLLMKIRThySplqceEGeinggFRVFERdEG 443
                     ***********************888733355799******************************987443212111111122223665544444 PP

            GRAS 357 slv.lgWkdrpLvsvSaWr 374
                      ++ lgW+dr L+++SaW+
  XP_022772395.1 444 KALsLGWQDRCLLTASAWQ 462
                     4445**************6 PP
Sequence ? help Back to Top
Protein Sequence    Length: 464 aa     Download sequence    
MEDIDEEELL NLGLSTVTDT SVEKNRKRKR TANVTKPLKP SNESCEGKII FKLLQVREEM  60
LKLDHKRKGV VEDGKALHLI HLLLIAATSV DNNNVNPALE NLIQLYQSVS LMGDSVQRVV  120
AYFADGLAAR LLTRKSPFCD MIMKEPTAEE EFLAFTCLYR VSPYYQFAHF TANQAIIEAF  180
EKEEEINNRA LHVIDFDVSY GFQWPSLIQS LSDKASNCKR ISLRLTGYGR SLEELQETQT  240
RLVSFAEEFR NLVFEFQGLL RGPMIKLINL RKKKNETVVV NFVSHLNTLN NFLKISETLK  300
SVHSLRPSIV ILVEQEGSRS PRSFLSRFME SLHYFAAMFD SLDDCLPLES AERLSIEKNH  360
LGKEIKTMVN CDKDEETKSC TRYEKMETWK SRMESHGFEE MKLSSKCLIQ AKLLMKIRTH  420
YSPLQCEEGE INGGFRVFER DEGKALSLGW QDRCLLTASA WQCV
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G41920.19e-53GRAS family protein