PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_022771393.1

Organism

Durio zibethinus

Taxonomic ID

66656

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Malvales; Malvaceae; Helicteroideae; Durio

Family

bHLH

Protein Properties

Length: 568aa MW: 61682 Da PI: 7.1419

Description

bHLH family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_022771393.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	HLH	50.3	4.3e-16	355	401	4	55
HHHHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHHH CS HLH 4 ahnerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksLq 55 hn ErrRRdriN+++ L++l+P + K +Ka++L +A+eY+ksLq XP_022771393.1 355 VHNLSERRRRDRINEKMKALQQLIPRC-----NKSDKASMLDEAIEYLKSLQ 401 6***********************8.....6****************9 PP

Sequence ? help Back to Top
Protein Sequence Length: 568 aa Download sequence
MNHCVPDFEM EDDYSIPSSS SLTRPKRPSM PEDEIMELLW QNGQVVMQSQ NQRSLKKSPP 60 FKFHDAYQSA SGEIRPSSSH QYHHHQQQQQ QPVTDHLFMQ EDEMASWLHY PLSDANFDQD 120 FCTDLLYPSS AAPCVTSTAA TSAPPPLGRV SQVSASASAV ASASRPPIPP ARRNDLESTR 180 IQNFVHFSRH KTARAGQFGP LNSKSVVRES TVVDSSDTPA MAPESGASQA VPSNTEAASG 240 RNNNNTCANM STTAVTNTQS VGVSMGASKD NLATCEVTMI SSPGGSSASA SASASASASA 300 EPATLKAVPA EDRKRKGREH DEAECQSEDA EFEFADTKKQ THGSTSTKRS RAAEVHNLSE 360 RRRRDRINEK MKALQQLIPR CNKSDKASML DEAIEYLKSL QLQVQIMSMG CGMVPMMFPG 420 VQQYMPTMGM GIGMGMGMDM GISRPMMPFP NVLAGSALPT PAGAAHLGPR FPMPAFHMPP 480 PVPAPDPSRI QPNNQSDAML NPLGTQNPNQ PQVPNFADPY QHYIGLHQMQ LPPPQSQAMA 540 QPSSRKPSTS RGAENLENHP SGDTKRKR

Sequence ? help Back to Top

Protein Sequence Length: 568 aa Download sequence

MNHCVPDFEM EDDYSIPSSS SLTRPKRPSM PEDEIMELLW QNGQVVMQSQ NQRSLKKSPP  60
FKFHDAYQSA SGEIRPSSSH QYHHHQQQQQ QPVTDHLFMQ EDEMASWLHY PLSDANFDQD  120
FCTDLLYPSS AAPCVTSTAA TSAPPPLGRV SQVSASASAV ASASRPPIPP ARRNDLESTR  180
IQNFVHFSRH KTARAGQFGP LNSKSVVRES TVVDSSDTPA MAPESGASQA VPSNTEAASG  240
RNNNNTCANM STTAVTNTQS VGVSMGASKD NLATCEVTMI SSPGGSSASA SASASASASA  300
EPATLKAVPA EDRKRKGREH DEAECQSEDA EFEFADTKKQ THGSTSTKRS RAAEVHNLSE  360
RRRRDRINEK MKALQQLIPR CNKSDKASML DEAIEYLKSL QLQVQIMSMG CGMVPMMFPG  420
VQQYMPTMGM GIGMGMGMDM GISRPMMPFP NVLAGSALPT PAGAAHLGPR FPMPAFHMPP  480
PVPAPDPSRI QPNNQSDAML NPLGTQNPNQ PQVPNFADPY QHYIGLHQMQ LPPPQSQAMA  540
QPSSRKPSTS RGAENLENHP SGDTKRKR

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	360	365	ERRRRD

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT2G20180.2	5e-80	bHLH family protein