PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_022771022.1

Organism

Durio zibethinus

Taxonomic ID

66656

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Malvales; Malvaceae; Helicteroideae; Durio

Family

Trihelix

Protein Properties

Length: 316aa MW: 35873.1 Da PI: 5.8549

Description

Trihelix family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_022771022.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	trihelix	73.9	2.7e-23	37	130	1	85
trihelix 1 rWtkqevlaLiearremeerlrrgk.........lkkplWeevskkmrergferspkqCkekwenlnkrykkikegekkrtsessstcpyfdql 85 rWt+qe+ +Li+a+ +e+r r+++ +++p+W+++s++++++gf r+p+qC+++w+nl ++kkik++e + ++e++s + + ++l XP_022771022.1 37 RWTRQETIVLIQAKLAVENRARSRSrslsifasdQNEPKWDSISSYCKQHGFGREPVQCQKRWSNLLSDFKKIKTWELQMEKEAESFWLMRSDL 130 8******************9765566677777******************************************9988888888777766 PP

Sequence ? help Back to Top
Protein Sequence Length: 316 aa Download sequence
MEPDPINMQE NASCLLDESQ EQTFHATDSK TNTRHVRWTR QETIVLIQAK LAVENRARSR 60 SRSLSIFASD QNEPKWDSIS SYCKQHGFGR EPVQCQKRWS NLLSDFKKIK TWELQMEKEA 120 ESFWLMRSDL RRERKLPSLY DREVYDILDG KGFAMAATPL AHVTAMTEID NSNRGQAAIA 180 AAAAAEEKQE NDDEEAEEEI GQGNEKETIA MRSPVKTVNT PSPISGEAKE KCPGSISRTG 240 SMVQEGLKRR RLSIDGSEDN NWAKILKRNS NILSSQLEAQ NINYQLDRDQ RKEQADNLVA 300 ALNKLTDAMV RIANKL

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	248	252	KRRRL

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT2G33550.1	1e-66	Trihelix family protein