PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_022770996.1

Organism

Durio zibethinus

Taxonomic ID

66656

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Malvales; Malvaceae; Helicteroideae; Durio

Family

bHLH

Protein Properties

Length: 540aa MW: 59515.8 Da PI: 5.6805

Description

bHLH family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_022770996.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	HLH	35.9	1.4e-11	355	397	7	54
HHHHHHHHHHHHHHHHHHCTSCC.C...TTS-STCHHHHHHHHHHHHHH CS HLH 7 erErrRRdriNsafeeLrellPk.askapskKlsKaeiLekAveYIksL 54 ++ErrRR+++N+++ Lr+++Pk + K++ a+iL A+eY+k+L XP_022770996.1 355 MAERRRRKKLNDRLYMLRSVVPKiS------KMDRASILGDAIEYLKEL 397 79*******************66......**************98 PP

Sequence ? help Back to Top
Protein Sequence Length: 540 aa Download sequence
MLSRVNAGVV WMEDKEDEDP ASWNRTNNKN NNGVIMENKE EMGSLSTFKS ILEEEWYVSN 60 NSISSPQDIR DISFSPNLGD HQDNLLLHHH PVDSSSSCSP SSSVFNNLDP SQIQYLLQPK 120 PNLSSLLNVV SNNPLVHGFD LSEIGFLDNQ ATNSTTLLST GNAGVLGSFT DLSHGSQIDT 180 SNLCPETQFS SSRIVHLPEN GVRFAGFQEF DDNPGNALFL NRSKLLRPLE SFPSVGAQPT 240 LFQKRAALRK NLADNGGNFG VLGEGKVNAS SGIEGDKRKK EMGEEIEKRK INNRDDLEDV 300 SIDGSALNYD SDELTENNKV AETLKNGGNT SNANSTVTGG DQKGKKKGLP AKNLMAERRR 360 RKKLNDRLYM LRSVVPKISK MDRASILGDA IEYLKELLQR INDLHNELES NPPSSSLTPT 420 TSFHPLTPTP VTLPSRIIKD ELCPSSLPSP NGQPARVEVR LREGKAVNIH MFCGRRPGLL 480 LSTMRALDNL GLDIQQAVIS CFNGFAMDIF RAEQCKEGQD IYPEQIKAVL LDLAGFHNMI

Sequence ? help Back to Top

Protein Sequence Length: 540 aa Download sequence

MLSRVNAGVV WMEDKEDEDP ASWNRTNNKN NNGVIMENKE EMGSLSTFKS ILEEEWYVSN  60
NSISSPQDIR DISFSPNLGD HQDNLLLHHH PVDSSSSCSP SSSVFNNLDP SQIQYLLQPK  120
PNLSSLLNVV SNNPLVHGFD LSEIGFLDNQ ATNSTTLLST GNAGVLGSFT DLSHGSQIDT  180
SNLCPETQFS SSRIVHLPEN GVRFAGFQEF DDNPGNALFL NRSKLLRPLE SFPSVGAQPT  240
LFQKRAALRK NLADNGGNFG VLGEGKVNAS SGIEGDKRKK EMGEEIEKRK INNRDDLEDV  300
SIDGSALNYD SDELTENNKV AETLKNGGNT SNANSTVTGG DQKGKKKGLP AKNLMAERRR  360
RKKLNDRLYM LRSVVPKISK MDRASILGDA IEYLKELLQR INDLHNELES NPPSSSLTPT  420
TSFHPLTPTP VTLPSRIIKD ELCPSSLPSP NGQPARVEVR LREGKAVNIH MFCGRRPGLL  480
LSTMRALDNL GLDIQQAVIS CFNGFAMDIF RAEQCKEGQD IYPEQIKAVL LDLAGFHNMI

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	345	363	KKKGLPAKNLMAERRRRKK
2	357	364	ERRRRKKL

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G26744.1	1e-123	bHLH family protein