PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_022770972.1
Organism
Durio zibethinus
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Malvales; Malvaceae; Helicteroideae; Durio
Family ARF
Protein Properties Length: 836aa    MW: 92807.3 Da    PI: 6.9712
Description ARF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_022770972.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1B373.82.1e-23139240199
                     EEEE-..-HHHHTT-EE--HHH.HTT......---..--SEEEEEETTS-EEEEEE..EEETTEEEE-TTHHHHHHHHT--TT-EEEEEE-SSSE CS
              B3   1 ffkvltpsdvlksgrlvlpkkfaeeh......ggkkeesktltledesgrsWevkliyrkksgryvltkGWkeFvkangLkegDfvvFkldgrse 89 
                     f+k+lt sd++++g +++ +++a+e+      +  ++ +++l  +d++g++W++++i+r++++r++l++GW+ Fv++++L +gD ++F   + ++
  XP_022770972.1 139 FCKTLTASDTSTHGGFSVLRRHADEClppldmS-RQPPTQELAAKDLHGNEWRFRHIFRGQPRRHLLQSGWSVFVSSKRLVAGDAFIFL--RGEN 230
                     99*****************************73.3334459************************************************..4499 PP

                     E..EEEEE-S CS
              B3  90 felvvkvfrk 99 
                     +el+v+v+r+
  XP_022770972.1 231 GELRVGVRRA 240
                     99*****996 PP
2Auxin_resp118.55.2e-39265347183
      Auxin_resp   1 aahaastksvFevvYnPrastseFvvkvekvekalkvkvsvGmRfkmafetedsserrlsGtvvgvsdldpvrWpnSkWrsLk 83 
                     a+ha +t+++F+v+Y+Pr+s++eF+v+++++++++k+++s+GmRfkm+fe+e+++e+r++Gt+vg++d+dp rW++SkWr+Lk
  XP_022770972.1 265 AWHAYTTRTIFTVYYKPRTSPAEFIVPFDRYMESVKNNYSIGMRFKMRFEGEEAPEQRFTGTIVGIEDADPKRWQDSKWRCLK 347
                     79*******************************************************************************96 PP
Sequence ? help Back to Top
Protein Sequence    Length: 836 aa     Download sequence    
MTTSEPNDAR NTMERQNGNS TRPAVVRDPE TALYTELWHA CAGPLVTVPR EGERVFYFAQ  60
GHIEQVEAST NQVADQQMPV YDLPSKILCR VINVQLKAEP DTDEVFAQVT LLPEPIQDEN  120
TVNKEPPIPQ PPQFNVHSFC KTLTASDTST HGGFSVLRRH ADECLPPLDM SRQPPTQELA  180
AKDLHGNEWR FRHIFRGQPR RHLLQSGWSV FVSSKRLVAG DAFIFLRGEN GELRVGVRRA  240
MRQQGNVPSS VISSHSMHLG VLATAWHAYT TRTIFTVYYK PRTSPAEFIV PFDRYMESVK  300
NNYSIGMRFK MRFEGEEAPE QRFTGTIVGI EDADPKRWQD SKWRCLKVRW DETSTIPRPE  360
RVSPWKIEPA LAPPALNPLP MTRPKRTRSN AVPSSPDSTL LTKEGSSKVT VDPSTASGFS  420
RVLQGQEFST LRGNFSESNE PDTAEKSVIW APSVDDEKID VGCASRRFGS ENWISSGRHG  480
PTCTDLLSGF GSNADSSHGY CPSLVDQTSV AGNPMGKQLL HQEGKLGSWS LMPSGLSLKF  540
ADTNAKPPVQ GSDVPYQARG NGRFSGFGDY PILQSNGIQH SHGSWLMPPP TSSLYENQVN  600
SRDLMPKTSL VQEHENGKSR EGNCKLFGIP LISNSVASQP ALPYINALNK PVGHIQAASH  660
QILAFESDQK SKRSKVSQLA EDLSSFNEQD KVFQLGQPHA REIQSKSPSA STRSCTKVHK  720
QGIALGRSVD LTKFSNYDEL ISELDQLFEF GGELMAPKKN WLVVYTDNEG DMMLVGDDPW  780
QEFCAMVRKI GIYTREEVQK MKPGSLSSKS EDNRASAEGL DAKEVKCPAA SIAENC
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G62000.30.0ARF family protein