PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_022770654.1

Organism

Durio zibethinus

Taxonomic ID

66656

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Malvales; Malvaceae; Helicteroideae; Durio

Family

MYB_related

Protein Properties

Length: 718aa MW: 79167.4 Da PI: 6.5116

Description

MYB_related family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_022770654.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Myb_DNA-binding	49.1	1.3e-15	24	68	1	47
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHH CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqky 47 r rWT++E+ ++++a k++G W +I +++g ++t+ q++s+ qk+ XP_022770654.1 24 RERWTEDEHNRFLEALKLYGRA-WQRIEEHIG-TKTAVQIRSHAQKF 68 78****************88.*****.**********98 PP

Sequence ? help Back to Top
Protein Sequence Length: 718 aa Download sequence
MDTYSSGEEL VFKTRKPYTI TKQRERWTED EHNRFLEALK LYGRAWQRIE EHIGTKTAVQ 60 IRSHAQKFFS KVIWCLLAYA YIQCYWRSPA NYVKLKLEKE ALAKGITIGQ ALDIEIPPPR 120 PKRKPSNPYP RKTGAATSAQ VGSKDGKSEM SISLRCKKVL DLEKEPLPER PKGDEKPRNL 180 KENQDESCSE GFTLLHEANC SSVSSANKNS ISSSAPVRNS CTFREFVPSL KETIQDNGTN 240 KASNLENSCM SHDKSAQGQK KDYLDGALHT DEMQATQNYP RHVAVHVLDG SLGTCAQNPS 300 QDTHFQDSVF HPMGDVHGQP NMFANPAASA TTEHQNNEPR SPHQAFPTFH TPFMHVRPNQ 360 EDYRSFLHVS SNFSSLIVST LLQNPAAHAA ASFAATFCPY ANVESSVDSP ACSQGGFPSG 420 QMNSAPSMAA IAAATVAAAT AWWAAHGLLP DQQLDPEYSE GLQGQHSASR SPTSSSSDCE 480 ESGDAKVNTE VKADDDEKAG AVTEPQDANK TKNRKQVDRS SCGSNTPSSS EVETDMLEKH 540 EKDNEDSKGA DANHPQAECS NRRSRSISNL SDSWKEVSEE GRLAFQALFS RDVLPQSFSP 600 PHDDKNKAQQ KENVGEDERN TDEKDREAST LDLNSKAWGS CSDHQEVEKN ALSRGESIVE 660 ESLLTIGLGH AKLKARRTGF KPYKRCSVEA MENRVMNTGS QGEEKGPKRI RLGGEAST

Sequence ? help Back to Top

Protein Sequence Length: 718 aa Download sequence

MDTYSSGEEL VFKTRKPYTI TKQRERWTED EHNRFLEALK LYGRAWQRIE EHIGTKTAVQ  60
IRSHAQKFFS KVIWCLLAYA YIQCYWRSPA NYVKLKLEKE ALAKGITIGQ ALDIEIPPPR  120
PKRKPSNPYP RKTGAATSAQ VGSKDGKSEM SISLRCKKVL DLEKEPLPER PKGDEKPRNL  180
KENQDESCSE GFTLLHEANC SSVSSANKNS ISSSAPVRNS CTFREFVPSL KETIQDNGTN  240
KASNLENSCM SHDKSAQGQK KDYLDGALHT DEMQATQNYP RHVAVHVLDG SLGTCAQNPS  300
QDTHFQDSVF HPMGDVHGQP NMFANPAASA TTEHQNNEPR SPHQAFPTFH TPFMHVRPNQ  360
EDYRSFLHVS SNFSSLIVST LLQNPAAHAA ASFAATFCPY ANVESSVDSP ACSQGGFPSG  420
QMNSAPSMAA IAAATVAAAT AWWAAHGLLP DQQLDPEYSE GLQGQHSASR SPTSSSSDCE  480
ESGDAKVNTE VKADDDEKAG AVTEPQDANK TKNRKQVDRS SCGSNTPSSS EVETDMLEKH  540
EKDNEDSKGA DANHPQAECS NRRSRSISNL SDSWKEVSEE GRLAFQALFS RDVLPQSFSP  600
PHDDKNKAQQ KENVGEDERN TDEKDREAST LDLNSKAWGS CSDHQEVEKN ALSRGESIVE  660
ESLLTIGLGH AKLKARRTGF KPYKRCSVEA MENRVMNTGS QGEEKGPKRI RLGGEAST

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G01060.3	1e-117	MYB_related family protein