PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_022770653.1

Organism

Durio zibethinus

Taxonomic ID

66656

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Malvales; Malvaceae; Helicteroideae; Durio

Family

MYB_related

Protein Properties

Length: 724aa MW: 79350.4 Da PI: 6.2193

Description

MYB_related family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_022770653.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Myb_DNA-binding	49.1	1.3e-15	24	68	1	47
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHH CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqky 47 r rWT++E+ ++++a k++G W +I +++g ++t+ q++s+ qk+ XP_022770653.1 24 RERWTEDEHNRFLEALKLYGRA-WQRIEEHIG-TKTAVQIRSHAQKF 68 78****************88.*****.**********98 PP

Sequence ? help Back to Top
Protein Sequence Length: 724 aa Download sequence
MDTYSSGEEL VFKTRKPYTI TKQRERWTED EHNRFLEALK LYGRAWQRIE EHIGTKTAVQ 60 IRSHAQKFFS KVIWCLLAYA YIQCYWRSPA NYVKLKLEKE ALAKGITIGQ ALDIEIPPPR 120 PKRKPSNPYP RKTGAATSAQ VGSKDGKSEM SISLRCKKVL DLEKEPLPER PKGDEKPRNL 180 KENQDESCSE GFTLLHEANC SSVSSANKNS ISSSAPVRNS CTFREFVPSL KETIQDNGTN 240 KASNLENSCM SHDKSAQGQK KDYLDGALHT DEMQATQNYP RHVAVHVLDG SLGTCAQNPS 300 QDTHFQDSVF HPMGDVHGQP NMFANPAASA TTEHQNNEPR SPHQNPAAHA AASFAATFCP 360 YANVESSVDS PACSQGGFPS GQMNSAPSMA AIAAATVAAA TAWWAAHGLL PVCAPLHAGF 420 NCAPASTAAD PPMENGQAPT AKTERKDNTD QDFSMQDQQL DPEYSEGLQG QHSASRSPTS 480 SSSDCEESGD AKVNTEVKAD DDEKAGAVTE PQDANKTKNR KQVDRSSCGS NTPSSSEVET 540 DMLEKHEKDN EDSKGADANH PQAECSNRRS RSISNLSDSW KEVSEEGRLA FQALFSRDVL 600 PQSFSPPHDD KNKAQQKENV GEDERNTDEK DREASTLDLN SKAWGSCSDH QEVEKNALSR 660 GESIVEESLL TIGLGHAKLK ARRTGFKPYK RCSVEAMENR VMNTGSQGEE KGPKRIRLGG 720 EAST

Sequence ? help Back to Top

Protein Sequence Length: 724 aa Download sequence

MDTYSSGEEL VFKTRKPYTI TKQRERWTED EHNRFLEALK LYGRAWQRIE EHIGTKTAVQ  60
IRSHAQKFFS KVIWCLLAYA YIQCYWRSPA NYVKLKLEKE ALAKGITIGQ ALDIEIPPPR  120
PKRKPSNPYP RKTGAATSAQ VGSKDGKSEM SISLRCKKVL DLEKEPLPER PKGDEKPRNL  180
KENQDESCSE GFTLLHEANC SSVSSANKNS ISSSAPVRNS CTFREFVPSL KETIQDNGTN  240
KASNLENSCM SHDKSAQGQK KDYLDGALHT DEMQATQNYP RHVAVHVLDG SLGTCAQNPS  300
QDTHFQDSVF HPMGDVHGQP NMFANPAASA TTEHQNNEPR SPHQNPAAHA AASFAATFCP  360
YANVESSVDS PACSQGGFPS GQMNSAPSMA AIAAATVAAA TAWWAAHGLL PVCAPLHAGF  420
NCAPASTAAD PPMENGQAPT AKTERKDNTD QDFSMQDQQL DPEYSEGLQG QHSASRSPTS  480
SSSDCEESGD AKVNTEVKAD DDEKAGAVTE PQDANKTKNR KQVDRSSCGS NTPSSSEVET  540
DMLEKHEKDN EDSKGADANH PQAECSNRRS RSISNLSDSW KEVSEEGRLA FQALFSRDVL  600
PQSFSPPHDD KNKAQQKENV GEDERNTDEK DREASTLDLN SKAWGSCSDH QEVEKNALSR  660
GESIVEESLL TIGLGHAKLK ARRTGFKPYK RCSVEAMENR VMNTGSQGEE KGPKRIRLGG  720
EAST

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G01060.3	1e-107	MYB_related family protein