PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_022769763.1

Organism

Durio zibethinus

Taxonomic ID

66656

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Malvales; Malvaceae; Helicteroideae; Durio

Family

bHLH

Protein Properties

Length: 391aa MW: 44190.5 Da PI: 5.0041

Description

bHLH family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_022769763.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	HLH	42.2	1.4e-13	205	256	1	55
CHHHHHHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHHH CS HLH 1 rrrahnerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksLq 55 +r++h ++Er+RR+++N+ ++ Lr+l+P++ + ++ + a+i A++++k+L+ XP_022769763.1 205 QRMTHIAVERNRRRQMNDYLNSLRSLMPPS---YIQRGDQASIIGGAIDFVKELE 256 79**************************...9****************995 PP

Sequence ? help Back to Top
Protein Sequence Length: 391 aa Download sequence
MERLQGPINP CLLGEDLEVE CLEQGFVNSE SLRFGEKEEE EEEDAHFSIP SLEDKMPFLQ 60 MLQSVESPQL FAFKEPNFQT LLRLQHSKKT LEINNNPFVL EMETQIQAIE FESCVTHEVL 120 DLHSPVISET KDFKRNANSS SCFEVVSSES NQDPPKSATA DNCSREGNSG SSPQKNFTKS 180 PSITRERRKR KRTKPAKNKE EVESQRMTHI AVERNRRRQM NDYLNSLRSL MPPSYIQRGD 240 QASIIGGAID FVKELEQLLQ SQEAQKKMRR IEESNNSVSK SAMEISQPES GIGSEDGNCG 300 EEVHAESKSG AAEIDVNVIH NHVNLKIQCS RRPGQLLQAI VTLESLRLTV LHLNITSTQA 360 SVLYSFNLKM EDDCHLRSAD EIEAAVHQIF S

Sequence ? help Back to Top

Protein Sequence Length: 391 aa Download sequence

MERLQGPINP CLLGEDLEVE CLEQGFVNSE SLRFGEKEEE EEEDAHFSIP SLEDKMPFLQ  60
MLQSVESPQL FAFKEPNFQT LLRLQHSKKT LEINNNPFVL EMETQIQAIE FESCVTHEVL  120
DLHSPVISET KDFKRNANSS SCFEVVSSES NQDPPKSATA DNCSREGNSG SSPQKNFTKS  180
PSITRERRKR KRTKPAKNKE EVESQRMTHI AVERNRRRQM NDYLNSLRSL MPPSYIQRGD  240
QASIIGGAID FVKELEQLLQ SQEAQKKMRR IEESNNSVSK SAMEISQPES GIGSEDGNCG  300
EEVHAESKSG AAEIDVNVIH NHVNLKIQCS RRPGQLLQAI VTLESLRLTV LHLNITSTQA  360
SVLYSFNLKM EDDCHLRSAD EIEAAVHQIF S

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	187	192	RRKRKR
2	188	195	RKRKRTKP
3	206	217	RMTHIAVERNRR

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G61950.1	1e-75	bHLH family protein