PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_022769754.1

Organism

Durio zibethinus

Taxonomic ID

66656

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Malvales; Malvaceae; Helicteroideae; Durio

Family

bHLH

Protein Properties

Length: 498aa MW: 55558.8 Da PI: 5.2543

Description

bHLH family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_022769754.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	HLH	38.1	2.7e-12	321	366	4	54
HHHHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHH CS HLH 4 ahnerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksL 54 +h e+Er+RR+++N++f Lr ++P+ +++Ka+ L Av YI++L XP_022769754.1 321 NHVEAERQRREKLNHRFYALRAVVPNV-----SRMDKASLLSDAVSYINEL 366 799*********************6.....4*************998 PP

Sequence ? help Back to Top
Protein Sequence Length: 498 aa Download sequence
MEELIISPSS SSSLVPFSQE TPPTTLQQRL QFVIQSQQDW WAYAIFWQTS NDDHGRLLLA 60 WGDGHFQGAN DTSPKSLSAN IYNMQCLHNE RRKVMKGIQA LIGDNHSFDM SMIDGTDITD 120 AEWFYVMSLT RSFSAGDGIL GKALSTGSLV WLTGAHELQF YNCERAREAQ MHGIETLVCI 180 PTSCGVLELG SSEMIRENWG LVQQVKSLFE SELIGLVPKQ SNPNPNLTPG PIQFLDRNIS 240 FADIGIIAGV QEEDATLDDK TKQEDHNNQT KKNSTKPGQS SFVDSEHSDS DCPLLSMNNI 300 EKITPKKRGR KPGLGRETPL NHVEAERQRR EKLNHRFYAL RAVVPNVSRM DKASLLSDAV 360 SYINELKAKI EELESQLQRE CKKVKVEMVD AMDNQSTTTS VDQAVRPSNS SSGTAGFGGL 420 ELDIKIMGSD TMIRVQSENV NYPAARLMGV LRDLEFQVHH ASMSCVNELM LQDILVKVPD 480 GLKTEEGLKS ALLRRLEQ

Sequence ? help Back to Top

Protein Sequence Length: 498 aa Download sequence

MEELIISPSS SSSLVPFSQE TPPTTLQQRL QFVIQSQQDW WAYAIFWQTS NDDHGRLLLA  60
WGDGHFQGAN DTSPKSLSAN IYNMQCLHNE RRKVMKGIQA LIGDNHSFDM SMIDGTDITD  120
AEWFYVMSLT RSFSAGDGIL GKALSTGSLV WLTGAHELQF YNCERAREAQ MHGIETLVCI  180
PTSCGVLELG SSEMIRENWG LVQQVKSLFE SELIGLVPKQ SNPNPNLTPG PIQFLDRNIS  240
FADIGIIAGV QEEDATLDDK TKQEDHNNQT KKNSTKPGQS SFVDSEHSDS DCPLLSMNNI  300
EKITPKKRGR KPGLGRETPL NHVEAERQRR EKLNHRFYAL RAVVPNVSRM DKASLLSDAV  360
SYINELKAKI EELESQLQRE CKKVKVEMVD AMDNQSTTTS VDQAVRPSNS SSGTAGFGGL  420
ELDIKIMGSD TMIRVQSENV NYPAARLMGV LRDLEFQVHH ASMSCVNELM LQDILVKVPD  480
GLKTEEGLKS ALLRRLEQ

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G17880.1	1e-100	bHLH family protein