PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_022769468.1

Organism

Durio zibethinus

Taxonomic ID

66656

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Malvales; Malvaceae; Helicteroideae; Durio

Family

SBP

Protein Properties

Length: 536aa MW: 57458.6 Da PI: 7.1485

Description

SBP family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_022769468.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	SBP	132.4	1.5e-41	176	251	2	77
-SSTT-----TT--HHHHHTT--HHHHT-S-EEETTEEEEE-TTTSSEEETTT--SS--S-STTTT-------S-- CS SBP 2 CqvegCeadlseakeyhrrhkvCevhskapvvlvsgleqrfCqqCsrfhelsefDeekrsCrrrLakhnerrrkkq 77 Cqv gC++dl++ k+yh+rhkvCevhsk+ +v+v+g+eqrfCqqCsrfh l efD++krsCr+rLa+hnerrrk+q XP_022769468.1 176 CQVYGCNKDLTSSKDYHKRHKVCEVHSKTGKVIVNGIEQRFCQQCSRFHLLAEFDHGKRSCRKRLAGHNERRRKPQ 251 **************************************************************************98 PP

Sequence ? help Back to Top
Protein Sequence Length: 536 aa Download sequence
MESWSYVSGE KGSVTDAEIS PSDSYARNRS AFMNWELKGP YSFSNNMLVS GQQATENHAF 60 GELGYGEFMG KQLPNDSIGD VLCSKVSGGG TVNPIMATLN AFSGVDESTS KLSSSVVDSN 120 SRDSSLIDLT LGRFPDHRDG QSSSFSIGAP ILSSSESSTP PKGVRAAGVN SHPAYCQVYG 180 CNKDLTSSKD YHKRHKVCEV HSKTGKVIVN GIEQRFCQQC SRFHLLAEFD HGKRSCRKRL 240 AGHNERRRKP QVGIHSGRTG RLLEQYNGFA GGRFHGTMLS TTSFICKGLL PSGRLHAEKF 300 VTNEWAKQVK VEDGPDYIPL SAIPIVNGHF PSKSSYSASG IEKLFTSFHD NGANIATGGI 360 SGENNARYPH DFGGPNSGSH PLFQGTPLRN EDISDFDATS TIRGLSGISD SSCALSLLSS 420 QSQNSSSHSS GIPMSRSLVI PGSQAHYNMS QVSEKLIGVN SQASTTGLSN KFSSPGMNST 480 EGSHLGSLLI SDGSEAANFG ICDGIYQGSE FINTRDRLSC EEGPTIDLLQ LSSQLQ

Sequence ? help Back to Top

Protein Sequence Length: 536 aa Download sequence

MESWSYVSGE KGSVTDAEIS PSDSYARNRS AFMNWELKGP YSFSNNMLVS GQQATENHAF  60
GELGYGEFMG KQLPNDSIGD VLCSKVSGGG TVNPIMATLN AFSGVDESTS KLSSSVVDSN  120
SRDSSLIDLT LGRFPDHRDG QSSSFSIGAP ILSSSESSTP PKGVRAAGVN SHPAYCQVYG  180
CNKDLTSSKD YHKRHKVCEV HSKTGKVIVN GIEQRFCQQC SRFHLLAEFD HGKRSCRKRL  240
AGHNERRRKP QVGIHSGRTG RLLEQYNGFA GGRFHGTMLS TTSFICKGLL PSGRLHAEKF  300
VTNEWAKQVK VEDGPDYIPL SAIPIVNGHF PSKSSYSASG IEKLFTSFHD NGANIATGGI  360
SGENNARYPH DFGGPNSGSH PLFQGTPLRN EDISDFDATS TIRGLSGISD SSCALSLLSS  420
QSQNSSSHSS GIPMSRSLVI PGSQAHYNMS QVSEKLIGVN SQASTTGLSN KFSSPGMNST  480
EGSHLGSLLI SDGSEAANFG ICDGIYQGSE FINTRDRLSC EEGPTIDLLQ LSSQLQ

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G69170.1	3e-47	SBP family protein