PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_022769044.1

Organism

Durio zibethinus

Taxonomic ID

66656

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Malvales; Malvaceae; Helicteroideae; Durio

Family

bHLH

Protein Properties

Length: 395aa MW: 43869.7 Da PI: 6.8802

Description

bHLH family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_022769044.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	HLH	14.9	4.9e-05	277	316	11	55
HHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHHH CS HLH 11 rRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksLq 55 R +++ ++++ L++l+ + +K + a++L +A+ YIk Lq XP_022769044.1 277 VRKEKLGDRIAALQQLVAPF-----GKTDTASVLMEAIGYIKFLQ 316 57788999*******998.....8****************9 PP

Sequence ? help Back to Top
Protein Sequence Length: 395 aa Download sequence
MEPENVHHQH QLQDQLVGSS SLPIPPSYGV ASSTHSWTPT SSSIILNTSE FIPVYNGDIS 60 HSMQKNSILA YSSQNSSMIQ DWTNNEGSFA THSCHDIHLA KIKEELSESL TRFTEMLSDT 120 SSRDVGDSRQ LPPTNYLKNN EQKDLHDLSE KLLLKTISSG FPMFSAGSEF YSTTQNCSIP 180 GSTCLPSRRN FSQIYPSINI SNLSQASSPN IPSSFDMNLE ALDLLSPARF SSRSSFTNPS 240 RDHNNLGIYK EISPSFGFHH HHFQQSNQRP AYSPSKVRKE KLGDRIAALQ QLVAPFGKTD 300 TASVLMEAIG YIKFLQNQVE TLSVPYMKSY RNKTSRSKQG GSTMEEGNEE EAKRDLRSRG 360 LCLVPLSCMS YVTNDSGGSI WPPPNFTGGT YNNNC

Sequence ? help Back to Top

Protein Sequence Length: 395 aa Download sequence

MEPENVHHQH QLQDQLVGSS SLPIPPSYGV ASSTHSWTPT SSSIILNTSE FIPVYNGDIS  60
HSMQKNSILA YSSQNSSMIQ DWTNNEGSFA THSCHDIHLA KIKEELSESL TRFTEMLSDT  120
SSRDVGDSRQ LPPTNYLKNN EQKDLHDLSE KLLLKTISSG FPMFSAGSEF YSTTQNCSIP  180
GSTCLPSRRN FSQIYPSINI SNLSQASSPN IPSSFDMNLE ALDLLSPARF SSRSSFTNPS  240
RDHNNLGIYK EISPSFGFHH HHFQQSNQRP AYSPSKVRKE KLGDRIAALQ QLVAPFGKTD  300
TASVLMEAIG YIKFLQNQVE TLSVPYMKSY RNKTSRSKQG GSTMEEGNEE EAKRDLRSRG  360
LCLVPLSCMS YVTNDSGGSI WPPPNFTGGT YNNNC

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G27660.1	1e-65	bHLH family protein