PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Home  TFext  BLAST  Prediction  Download  Help  About  Links  PlantRegMap
(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_022768835.1
Organism
Durio zibethinus
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Malvales; Malvaceae; Helicteroideae; Durio
Family B3
Protein Properties Length: 532aa    MW: 59831.3 Da    PI: 8.2677
Description B3 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_022768835.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1B352.21.1e-161299499
                    E-..-HHHHTT-EE--HHH.HTT---..--SEEEEEETTS-EEEEEE..EEETTEEEE-TTHHHHHHHHT--TT-EEEEEE-SSSEE..EEEEE-S CS
              B3  4 vltpsdvlksgrlvlpkkfaeehggkkeesktltledesgrsWevkliyrkksgryvltkGWkeFvkangLkegDfvvFkldgrsefelvvkvfrk 99
                    v+  s++++ +rl +p  f ++ +g    s  + l+ +sg  W v+l   +k +  ++ +GW +Fv+++ L+ gDf+vF++dg+  f  +vkvf++
  XP_022768835.1 12 VF--SSTSSANRLKIPVGFKTNLEGR--ISGSVLLKGPSGYGWVVEL--VQKNDDLFFDEGWADFVRDHSLECGDFLVFRYDGDLVF--NVKVFDQ 99
                    45..8889999********8666766..5557***************..8888899*************************998777..9999997 PP
2B352.87.3e-17226319298
                     EEE-..-HHHHTT-EE--HHH.HTT---..--SEEEEEETTS-EEEEEE...EEETTEEEE-TTHHHHHHHHT--TT-EEEEEE-SSSEE..EEE CS
              B3   2 fkvltpsdvlksgrlvlpkkfaeehggkkeesktltledesgrsWevkliy.rkksgryvltkGWkeFvkangLkegDfvvFkldgrsefelvvk 95 
                     + ++++ +v+ s  l +p +fa eh   ++++++++l++++g  W+v+    ++   +++l +GW +Fv++n++k+gD+++F++++  +fel+v+
  XP_022768835.1 226 VRIMKRFNVSGSYTLNIPYQFAMEHL--PKCKTEIVLRNLKGACWTVNSVPtTRVHTSHTLCGGWLGFVRSNEIKVGDICIFEFVR--KFELCVH 316
                     56667778888899********9996..34889***************954566666799***********************876..9****** PP

                     EE- CS
              B3  96 vfr 98 
                     ++r
  XP_022768835.1 317 ILR 319
                     998 PP
3B351.81.5e-164375181397
                     TT-EE--HHH.HTT.---..--SEEEEEETTS-EEEEEE..EEETTE.EEE-TTHHHHHHHHT--TT-EEEEEE-SSSEE..EEEEE CS
              B3  13 sgrlvlpkkfaeeh.ggkkeesktltledesgrsWevkliyrkksgr.yvltkGWkeFvkangLkegDfvvFkldgrsefelvvkvf 97 
                     s  l +p kf +++  ++   +++++l++++g+ W+v+   + k+++ +++ +GW  Fv++n++k gD+++F+l++  +fe++v++ 
  XP_022768835.1 437 SYTLKIPYKFSKAYlPYS---KTEVVLRNLQGKCWTVNSVPDSKGRTvHTFCGGWMAFVRDNDIKMGDICIFELVN--RFEMRVHIS 518
                     45699******9996444...458***************6655554469999*********************975..788899875 PP
Sequence ? help Back to Top
Protein Sequence    Length: 532 aa     Download sequence    
MLKSKRSHFL NVFSSTSSAN RLKIPVGFKT NLEGRISGSV LLKGPSGYGW VVELVQKNDD  60
LFFDEGWADF VRDHSLECGD FLVFRYDGDL VFNVKVFDQS LCEKEVAFHC KCSQGGSEFD  120
GIVGQKRDRE DGGVSLDQDC EGVLKRSRGS SSESDDNEYF GHEPMLATKT CEGLTSCDEN  180
HEGSILKTTV EDDDLNLHGS GCIPMVGEFE EKKVAQSFNS HFPFFVRIMK RFNVSGSYTL  240
NIPYQFAMEH LPKCKTEIVL RNLKGACWTV NSVPTTRVHT SHTLCGGWLG FVRSNEIKVG  300
DICIFEFVRK FELCVHILRV GKEDPDRQRG KAVPNVLIDR SDATISKKFV KNSSKVHSEP  360
KKVQMCDNKG SKMLDKWKYA ASFALCSLSR SGNDKQEAAI GGLRMMLALD EEKAARSFAS  420
GFPNFVRIMR KFNISGSYTL KIPYKFSKAY LPYSKTEVVL RNLQGKCWTV NSVPDSKGRT  480
VHTFCGGWMA FVRDNDIKMG DICIFELVNR FEMRVHISGP GREGLDFQRA SL
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G18990.17e-20B3 family protein