PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_022768605.1

Organism

Durio zibethinus

Taxonomic ID

66656

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Malvales; Malvaceae; Helicteroideae; Durio

Family

bHLH

Protein Properties

Length: 434aa MW: 47346.8 Da PI: 5.4964

Description

bHLH family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_022768605.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	HLH	31.1	4.3e-10	276	324	3	55
HHHHHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHHH CS HLH 3 rahnerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksLq 55 +h+ +Er RR++i +++ L+el+P + +k Ka +L + ++Y++sLq XP_022768605.1 276 NSHSLAERVRREKISERMRLLQELVPGC----NKITGKAVMLDEIINYVQSLQ 324 58************************....999***************9 PP

Sequence ? help Back to Top
Protein Sequence Length: 434 aa Download sequence
MASGDNDVVG FEHRNESLMN CPSSQMNRNP LSDKFDGMAM SSISMYNKPS NTSDPFFGSG 60 WDPIVSLSQS ESLGCSSMVS HSEFANSQYP LLIENQGMSS TSHFSQYQSD PSFVELVPKL 120 PGFGGGNLSE MVGPFSLPQC SQIANSRCPP NNALNSEVGN ERTSKNSTRS LDEQQISEEG 180 VVGASPNGKS RKRVPESNSP LRSFQNADEE PQKDPFLESC DVPKEQDGKK QKIEQNTGAN 240 PRGKQVAKQG KDSSQTGEAP KENYIHVRAR RGQATNSHSL AERVRREKIS ERMRLLQELV 300 PGCNKITGKA VMLDEIINYV QSLQQQVEFL TMKLATVNPE LNLDLERILS KDILLSRGSA 360 AVLGLGPGIN SFHPFSSGTF PGTISGIPST NPQFPSLPHQ TVLDNELQNL FQRGFDSTSA 420 MDCLGPNGLL KSEL

Sequence ? help Back to Top

Protein Sequence Length: 434 aa Download sequence

MASGDNDVVG FEHRNESLMN CPSSQMNRNP LSDKFDGMAM SSISMYNKPS NTSDPFFGSG  60
WDPIVSLSQS ESLGCSSMVS HSEFANSQYP LLIENQGMSS TSHFSQYQSD PSFVELVPKL  120
PGFGGGNLSE MVGPFSLPQC SQIANSRCPP NNALNSEVGN ERTSKNSTRS LDEQQISEEG  180
VVGASPNGKS RKRVPESNSP LRSFQNADEE PQKDPFLESC DVPKEQDGKK QKIEQNTGAN  240
PRGKQVAKQG KDSSQTGEAP KENYIHVRAR RGQATNSHSL AERVRREKIS ERMRLLQELV  300
PGCNKITGKA VMLDEIINYV QSLQQQVEFL TMKLATVNPE LNLDLERILS KDILLSRGSA  360
AVLGLGPGIN SFHPFSSGTF PGTISGIPST NPQFPSLPHQ TVLDNELQNL FQRGFDSTSA  420
MDCLGPNGLL KSEL

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G10120.1	1e-89	bHLH family protein