PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_022768477.1
Organism
Durio zibethinus
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Malvales; Malvaceae; Helicteroideae; Durio
Family GATA
Protein Properties Length: 352aa    MW: 38459.5 Da    PI: 4.4737
Description GATA family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_022768477.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1GATA50.13.8e-16203239135
            GATA   1 CsnCgttk..TplWRrgpdgnktLCnaCGlyyrkkgl 35 
                     C++Cg+++  Tp +Rrgp g++tLCnaCGl+++ kg+
  XP_022768477.1 203 CQHCGVSEnkTPAMRRGPAGPRTLCNACGLMWANKGT 239
                     *******999************************997 PP
Sequence ? help Back to Top
Protein Sequence    Length: 352 aa     Download sequence    
MKQPLQARPF EEHARGTIQI EDDDGDYEDD TMNDVEDANV NSVNVAEHGI GVIGGVNGGG  60
VVMASRTSEL TLSFEGEVYV FPAVTPEKVQ AVLLLLGGCD IPTGVPTIEV PFDQNNGGVG  120
DVSKRSNLSR RIASLVRFRE KRKERCFDKK IRYTVRKEVA QRMHRKNGQF ASLKESTSTS  180
SWDSSQTGLQ DGSPRPETVV RKCQHCGVSE NKTPAMRRGP AGPRTLCNAC GLMWANKGTL  240
RDLSKGGRNI SMDQTELETP IDVKPSIMEG DFSGNRDENF MQGNPSKDIM DGSNNASVNP  300
NEEDLHESAE DLTNSLPMGI VHPSADDDDE QEPLVELANP SDTEFDAPSS FD
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G21175.22e-64GATA family protein