PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_022768032.1
Organism
Durio zibethinus
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Malvales; Malvaceae; Helicteroideae; Durio
Family GRAS
Protein Properties Length: 555aa    MW: 62292.6 Da    PI: 4.8465
Description GRAS family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_022768032.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1GRAS452.23.4e-1381875553374
            GRAS   3 elLlecAeavssgdlelaqalLarlselaspdgdpmqRlaayfteALaarlarsvselykalppsetseknsseelaalklfsevsPilkfshlt 97 
                     + L++cA  +s+g+ e a+a++++l++l+s +gdp qR+aay++e+Laar+a s++ lykal+++e +   ss++laa+++++ev+P++kf++++
  XP_022768032.1 187 QMLIKCAAILSEGNIEDASAIINELRQLVSIQGDPPQRIAAYMVEGLAARMAASGKYLYKALRCKEPP---SSDRLAAMQILFEVCPCFKFGFMA 278
                     79*****************************************************************9...9*********************** PP

            GRAS  98 aNqaIleavegeervHiiDfdisqGlQWpaLlqaLasRpegppslRiTgvgspesg..skeeleetgerLakfAeelgvpfefnvlvakrledle 190
                     aN aI ea + e+rvHiiDfdi+qG Q+++L+q++a+Rp++pp+lR+Tgv++pes+   +  le +g rL+++Ae+lgvpfef++ va+r++ ++
  XP_022768032.1 279 ANGAIIEACKDEKRVHIIDFDINQGSQYITLIQTIAKRPGKPPHLRLTGVDDPESVqrLNGGLEIVGLRLENLAEALGVPFEFQA-VASRTSLVT 372
                     ******************************************************99777889***********************.7******** PP

            GRAS 191 leeLrvkpgEalaVnlvlqlhrlldesvsleserdevLklvkslsPkvvvvveqeadhnsesFlerflealeyysalfdsleaklpreseerikv 285
                     +++L++++gEal+Vn+++qlh+++desvs+ ++rd++L++vksl+Pk+v+vveq++++n+ +Fl rf+ea +yysa+f+sl+++lpres++r++v
  XP_022768032.1 373 PSMLDCRTGEALIVNFAFQLHHMPDESVSTINQRDQLLQMVKSLNPKLVTVVEQDINTNTLPFLPRFIEAYSYYSAVFESLDTTLPRESQDRMNV 467
                     *********************************************************************************************** PP

            GRAS 286 ErellgreivnvvacegaerrerhetlekWrerleeaGFkpvplsekaakqaklllrkvksdgyrveeesgslvlgWkdrpLvsvSaWr 374
                     Er++l+r+ivn+vaceg+er+er e ++kWr+r+++aGF++ p+s ++ + ++ l+r++ ++ y+++e+ g l +gW+d++L+++SaWr
  XP_022768032.1 468 ERQCLARDIVNIVACEGEERIERYEVAGKWRARMTMAGFTSCPMSPNVIDMIRKLIREYCDR-YKLKEDLGGLHFGWEDKSLIVASAWR 555
                     ************************************************************66.*************************8 PP
Sequence ? help Back to Top
Protein Sequence    Length: 555 aa     Download sequence    
MSLVSSAEPA SAAYRNTKLY SIQGSSNNSG LSTQMFSSDK HKPVYITDSY SSESYEKYFL  60
DSPSEELIHP SSSVISGSSF RPQDFSSYQL RGYLEIQSRD TLDSDTDKLK LKLQELERDL  120
LADNDVDEDD DMFFTGLRME IDGEWSDPIR TEALHESPKE SSTSDSYLSS ISSNKKVSHV  180
SSQTPKQMLI KCAAILSEGN IEDASAIINE LRQLVSIQGD PPQRIAAYMV EGLAARMAAS  240
GKYLYKALRC KEPPSSDRLA AMQILFEVCP CFKFGFMAAN GAIIEACKDE KRVHIIDFDI  300
NQGSQYITLI QTIAKRPGKP PHLRLTGVDD PESVQRLNGG LEIVGLRLEN LAEALGVPFE  360
FQAVASRTSL VTPSMLDCRT GEALIVNFAF QLHHMPDESV STINQRDQLL QMVKSLNPKL  420
VTVVEQDINT NTLPFLPRFI EAYSYYSAVF ESLDTTLPRE SQDRMNVERQ CLARDIVNIV  480
ACEGEERIER YEVAGKWRAR MTMAGFTSCP MSPNVIDMIR KLIREYCDRY KLKEDLGGLH  540
FGWEDKSLIV ASAWR
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G21450.10.0GRAS family protein