PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_022768031.1
Organism
Durio zibethinus
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Malvales; Malvaceae; Helicteroideae; Durio
Family GRAS
Protein Properties Length: 563aa    MW: 63085.4 Da    PI: 4.8465
Description GRAS family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_022768031.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1GRAS452.13.6e-1381955633374
            GRAS   3 elLlecAeavssgdlelaqalLarlselaspdgdpmqRlaayfteALaarlarsvselykalppsetseknsseelaalklfsevsPilkfshlt 97 
                     + L++cA  +s+g+ e a+a++++l++l+s +gdp qR+aay++e+Laar+a s++ lykal+++e +   ss++laa+++++ev+P++kf++++
  XP_022768031.1 195 QMLIKCAAILSEGNIEDASAIINELRQLVSIQGDPPQRIAAYMVEGLAARMAASGKYLYKALRCKEPP---SSDRLAAMQILFEVCPCFKFGFMA 286
                     79*****************************************************************9...9*********************** PP

            GRAS  98 aNqaIleavegeervHiiDfdisqGlQWpaLlqaLasRpegppslRiTgvgspesg..skeeleetgerLakfAeelgvpfefnvlvakrledle 190
                     aN aI ea + e+rvHiiDfdi+qG Q+++L+q++a+Rp++pp+lR+Tgv++pes+   +  le +g rL+++Ae+lgvpfef++ va+r++ ++
  XP_022768031.1 287 ANGAIIEACKDEKRVHIIDFDINQGSQYITLIQTIAKRPGKPPHLRLTGVDDPESVqrLNGGLEIVGLRLENLAEALGVPFEFQA-VASRTSLVT 380
                     ******************************************************99777889***********************.7******** PP

            GRAS 191 leeLrvkpgEalaVnlvlqlhrlldesvsleserdevLklvkslsPkvvvvveqeadhnsesFlerflealeyysalfdsleaklpreseerikv 285
                     +++L++++gEal+Vn+++qlh+++desvs+ ++rd++L++vksl+Pk+v+vveq++++n+ +Fl rf+ea +yysa+f+sl+++lpres++r++v
  XP_022768031.1 381 PSMLDCRTGEALIVNFAFQLHHMPDESVSTINQRDQLLQMVKSLNPKLVTVVEQDINTNTLPFLPRFIEAYSYYSAVFESLDTTLPRESQDRMNV 475
                     *********************************************************************************************** PP

            GRAS 286 ErellgreivnvvacegaerrerhetlekWrerleeaGFkpvplsekaakqaklllrkvksdgyrveeesgslvlgWkdrpLvsvSaWr 374
                     Er++l+r+ivn+vaceg+er+er e ++kWr+r+++aGF++ p+s ++ + ++ l+r++ ++ y+++e+ g l +gW+d++L+++SaWr
  XP_022768031.1 476 ERQCLARDIVNIVACEGEERIERYEVAGKWRARMTMAGFTSCPMSPNVIDMIRKLIREYCDR-YKLKEDLGGLHFGWEDKSLIVASAWR 563
                     ************************************************************66.*************************8 PP
Sequence ? help Back to Top
Protein Sequence    Length: 563 aa     Download sequence    
MSLVSSAEPA SAAYRNTKLY SIQGSSNNSG LSTQMFSSDK HKPVYITDSY SSESYEKYFL  60
DSPSEELIHP SSSVISGSSF RPQDFSSYQL RGTSVFSITG YLEIQSRDTL DSDTDKLKLK  120
LQELERDLLA DNDVDEDDDM FFTGLRMEID GEWSDPIRTE ALHESPKESS TSDSYLSSIS  180
SNKKVSHVSS QTPKQMLIKC AAILSEGNIE DASAIINELR QLVSIQGDPP QRIAAYMVEG  240
LAARMAASGK YLYKALRCKE PPSSDRLAAM QILFEVCPCF KFGFMAANGA IIEACKDEKR  300
VHIIDFDINQ GSQYITLIQT IAKRPGKPPH LRLTGVDDPE SVQRLNGGLE IVGLRLENLA  360
EALGVPFEFQ AVASRTSLVT PSMLDCRTGE ALIVNFAFQL HHMPDESVST INQRDQLLQM  420
VKSLNPKLVT VVEQDINTNT LPFLPRFIEA YSYYSAVFES LDTTLPRESQ DRMNVERQCL  480
ARDIVNIVAC EGEERIERYE VAGKWRARMT MAGFTSCPMS PNVIDMIRKL IREYCDRYKL  540
KEDLGGLHFG WEDKSLIVAS AWR
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G21450.10.0GRAS family protein