PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_022767425.1
Organism
Durio zibethinus
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Malvales; Malvaceae; Helicteroideae; Durio
Family MYB_related
Protein Properties Length: 348aa    MW: 38965.4 Da    PI: 9.5095
Description MYB_related family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_022767425.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Myb_DNA-binding44.34e-143983147
                     TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHH CS
  Myb_DNA-binding  1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqky 47
                     r +WT+eE++++++a +++  + Wk+I   +g  +t  q++s+ qky
   XP_022767425.1 39 RESWTEEEHDKFLEALQLFDRD-WKKIEDFVG-SKTVIQIRSHAQKY 83
                     789*****************77.*********.*************9 PP
Sequence ? help Back to Top
Protein Sequence    Length: 348 aa     Download sequence    
MESSSSPNPP APPPPQSSTT AADGSGKKVR KPYTITKSRE SWTEEEHDKF LEALQLFDRD  60
WKKIEDFVGS KTVIQIRSHA QKYFLKVQKN GTIAHVPPPR PKRKASHPYP QKATRNVLVP  120
LQASMAYPSS INAIALGFAP WDEASMLINT ASSKIMPPQD EFTSLRGAEA DIGSKGVARI  180
SNSGVSSIGN SSRTISSSDM PKQAKQAPMI HGIPDFAEVY NFIGSVFDPD TKGHIQKLKE  240
MDPINFETVL LLMRNLTVNL CSPDFEPIRK VLSSYDVSST NMHAWRFTTR RSCSHQLEKM  300
VEMMSGRMVF YYRPSTSLTS SEIRLDGCHH VLTYQPDNFL YILVSFVY
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G09600.11e-134MYB_related family protein