PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_022766940.1
Organism
Durio zibethinus
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Malvales; Malvaceae; Helicteroideae; Durio
Family NF-YA
Protein Properties Length: 330aa    MW: 36004.7 Da    PI: 9.7963
Description NF-YA family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_022766940.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1CBFB_NFYA881.3e-27160218158
       CBFB_NFYA   1 deplYVNaKQyqrIlkRRqkRakleeekkl.deksrkpylheSRhkhAlrRpRgsgGrF 58 
                     d p+YVNaKQy++I++RRq+R+k+  ++k+ ++++rk y+h SRh hA+rRpRg+gGrF
  XP_022766940.1 160 DGPIYVNAKQYNGIIRRRQSREKAVLQNKVpKARNRKTYMHYSRHLHAMRRPRGCGGRF 218
                     57***************************7356899**********************9 PP
Sequence ? help Back to Top
Protein Sequence    Length: 330 aa     Download sequence    
MAMQTRYLKE HDGIAHNPMG QTAPVPSLPW WSGLGSQSVY GESCGQLKPL LMEHPSTGDQ  60
VTSTKQAWRG TEQGLNKGNP TQFTIFPGGC KSSGDGQKPQ AVISLQSAPS ENGARFELGF  120
GQPTVCAKYP YMDQCYGVFS SYGPQISGRV MLPLNLATED GPIYVNAKQY NGIIRRRQSR  180
EKAVLQNKVP KARNRKTYMH YSRHLHAMRR PRGCGGRFLN LKSLNGGKDG TEMKKAAEVQ  240
LSHRTRSQNS EVLQSDSGTL NSSKEANGGG STLSGSEVTS MYSRGELENF PINHLGLSVH  300
SFPVMMDNGL GTVMPSKWVA TADNCCNLKV
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G06510.28e-65NF-YA family protein