PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_022766401.1

Organism

Durio zibethinus

Taxonomic ID

66656

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Malvales; Malvaceae; Helicteroideae; Durio

Family

HD-ZIP

Protein Properties

Length: 278aa MW: 31876.6 Da PI: 5.1679

Description

HD-ZIP family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_022766401.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Homeobox	58.7	9.5e-19	57	110	3	56
--SS--HHHHHHHHHHHHHSSS--HHHHHHHHHHCTS-HHHHHHHHHHHHHHHH CS Homeobox 3 kRttftkeqleeLeelFeknrypsaeereeLAkklgLterqVkvWFqNrRakek 56 k+++++ +q+++Le+ Fe ++++ e++ +LA++lgL+ rqV +WFqNrRa++k XP_022766401.1 57 KKRRLSIHQVKALEKNFEVENKLEPERKVKLAEELGLQPRQVAIWFQNRRARWK 110 5568999**********************************************9 PP
2	HD-ZIP_I/II	128.1	3.7e-41	56	148	1	93
HD-ZIP_I/II 1 ekkrrlskeqvklLEesFeeeekLeperKvelareLglqprqvavWFqnrRARtktkqlEkdyeaLkraydalkeenerLekeveeLreelke 93 ekkrrls +qvk+LE++Fe e+kLeperKv+la+eLglqprqva+WFqnrRAR+ktkqlEkdy+ Lk++ydalk + ++Le+e+e+L+++l+e XP_022766401.1 56 EKKRRLSIHQVKALEKNFEVENKLEPERKVKLAEELGLQPRQVAIWFQNRRARWKTKQLEKDYTILKANYDALKLDYNNLEQEKEALTAKLRE 148 69**************************************************************************************99986 PP

Sequence ? help Back to Top
Protein Sequence Length: 278 aa Download sequence
MKRPSSSGSL DALISICPPK EEKNSKNKQV YSREFQAMLD GLEEEDSLGE AGQATEKKRR 60 LSIHQVKALE KNFEVENKLE PERKVKLAEE LGLQPRQVAI WFQNRRARWK TKQLEKDYTI 120 LKANYDALKL DYNNLEQEKE ALTAKLRELK AKLKEENSES SQSVKEDSPK VSQQTKDHDF 180 CDNDDDSIGI VKEDCNVNAQ LLISPASSSP FRFNGSSSCS DSSNHQWFQS FDSRMILGNM 240 YHPQLVKVEE QCTFTAEESC NFFSVDQAPT LQWYFTGQ

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	57	86	KKRRLSIHQVKALEKNFEVENKLEPERKVK
2	105	113	RRARWKTKQ

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT2G22430.1	3e-49	HD-ZIP family protein