PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_022765158.1

Organism

Durio zibethinus

Taxonomic ID

66656

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Malvales; Malvaceae; Helicteroideae; Durio

Family

HD-ZIP

Protein Properties

Length: 590aa MW: 64984.2 Da PI: 7.6937

Description

HD-ZIP family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_022765158.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Homeobox	68.1	1.1e-21	118	174	1	57
TT--SS--HHHHHHHHHHHHHSSS--HHHHHHHHHHCTS-HHHHHHHHHHHHHHHHC CS Homeobox 1 rrkRttftkeqleeLeelFeknrypsaeereeLAkklgLterqVkvWFqNrRakekk 57 ++k +++t++q++eLe++F+++++p++++r eL+++lgL+ +q+k+WFqNrR+++k+ XP_022765158.1 118 KKKYHRHTPHQIQELESFFKECPHPDEKQRMELSRRLGLENKQIKFWFQNRRTQMKN 174 79999*************************************************995 PP
2	START	135.8	4.7e-43	171	319	68	204
CGG.CT-TT-S....EEEEEEEECTT......EEEEEEEEXXTTXX-SSX.EEEEEEEEEEE.TTS-EEEEEEEEE-TTS--.-TTSEE-EESSE CS START 68 dke.qWdetla....kaetlevissg......galqlmvaelqalsplvp.RdfvfvRyirqlgagdwvivdvSvdseqkppesssvvRaellpS 150 +++ +W e+++ +a++++vissg ++lq+m ae+q+lsplvp R + f+R+++q+++g+w++vdvS+d q+ + + + +++lpS XP_022765158.1 171 QMKnRWAEMFPcmisRAAIIDVISSGkgvtrdNTLQVMDAEFQVLSPLVPvRQVRFIRFCKQQSEGVWAVVDVSIDASQDAANIQMFPNCRRLPS 265 34469**************************************************************************9999999*** PP EEEEEEECTCEEEEEEEE-EE--SSXXHHHHHHHHHHHHHHHHHHHHHHTXXXX CS START 151 giliepksnghskvtwvehvdlkgrlphwllrslvksglaegaktwvatlqrqc 204 g++i++++n +skvtwveh +++++ +h+llr+l++sg +ga +wvatlqrq XP_022765158.1 266 GCVIQDMDNKYSKVTWVEHSEYDDSAVHYLLRPLLSSGFGFGAHRWVATLQRQS 319 *************************************************985 PP

Sequence ? help Back to Top
Protein Sequence Length: 590 aa Download sequence
MSFRGLIKSS SSSESGCVGA RIVVADIVPH RNMLSGAIVE PPLLTQHIPK SMQSSPSLSL 60 YYKRMDGHGE MGLIRENFDP GLVGMMKEDG YESRSGSDNF EGASGDDQDA SADGPPKKKK 120 YHRHTPHQIQ ELESFFKECP HPDEKQRMEL SRRLGLENKQ IKFWFQNRRT QMKNRWAEMF 180 PCMISRAAII DVISSGKGVT RDNTLQVMDA EFQVLSPLVP VRQVRFIRFC KQQSEGVWAV 240 VDVSIDASQD AANIQMFPNC RRLPSGCVIQ DMDNKYSKVT WVEHSEYDDS AVHYLLRPLL 300 SSGFGFGAHR WVATLQRQSD CLAVLMSPNI PGEDNTGITP AGRKSMIKLA QRMTNNFCSG 360 VCASSMHKWD KLSVGNVGED VRVMTRKNIN DPGEPRGVVL SASTSVWMLI NQKSLFDFLR 420 DEQMRSQWDI LSNGGPMQEM VKVAKGRGHG NYVSLLRGSA INANENNMLI LQETWSDVSG 480 ALVVYAPIDI SSMSVVMNGG DSTYVALLPS GFAILPCISP NNHVGQSNSN GPLVKPDIDG 540 SISGGCLLTV GFQILVNSAP TAKLTMESVE TVNNLISCTI QKIKAALAVT

Sequence ? help Back to Top

Protein Sequence Length: 590 aa Download sequence

MSFRGLIKSS SSSESGCVGA RIVVADIVPH RNMLSGAIVE PPLLTQHIPK SMQSSPSLSL  60
YYKRMDGHGE MGLIRENFDP GLVGMMKEDG YESRSGSDNF EGASGDDQDA SADGPPKKKK  120
YHRHTPHQIQ ELESFFKECP HPDEKQRMEL SRRLGLENKQ IKFWFQNRRT QMKNRWAEMF  180
PCMISRAAII DVISSGKGVT RDNTLQVMDA EFQVLSPLVP VRQVRFIRFC KQQSEGVWAV  240
VDVSIDASQD AANIQMFPNC RRLPSGCVIQ DMDNKYSKVT WVEHSEYDDS AVHYLLRPLL  300
SSGFGFGAHR WVATLQRQSD CLAVLMSPNI PGEDNTGITP AGRKSMIKLA QRMTNNFCSG  360
VCASSMHKWD KLSVGNVGED VRVMTRKNIN DPGEPRGVVL SASTSVWMLI NQKSLFDFLR  420
DEQMRSQWDI LSNGGPMQEM VKVAKGRGHG NYVSLLRGSA INANENNMLI LQETWSDVSG  480
ALVVYAPIDI SSMSVVMNGG DSTYVALLPS GFAILPCISP NNHVGQSNSN GPLVKPDIDG  540
SISGGCLLTV GFQILVNSAP TAKLTMESVE TVNNLISCTI QKIKAALAVT

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G00730.1	0.0	HD-ZIP family protein