PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_022764937.1
Organism
Durio zibethinus
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Malvales; Malvaceae; Helicteroideae; Durio
Family GRAS
Protein Properties Length: 472aa    MW: 53256.4 Da    PI: 5.7775
Description GRAS family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_022764937.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1GRAS453.31.5e-138454711373
            GRAS   1 lvelLlecAeavssgdlelaqalLarlselaspdgdpmqRlaayfteALaarlarsvselykalppsetseknsseelaalklfsevsPilkfsh 95 
                     l++lL++cA++v++g+le+a+  L+++s+laspdgd+mqR+aayfteALa r+++ +++l kal++++ s  ++see+ ++klf+e++P+lk+++
  XP_022764937.1  45 LIHLLVACANHVAAGSLENANFGLEQISHLASPDGDTMQRIAAYFTEALADRMLKAWPGLHKALNSTKIS--SVSEEILVQKLFFELCPFLKIAY 137
                     689*************************************************************999998..6********************** PP

            GRAS  96 ltaNqaIleavegeervHiiDfdisqGlQWpaLlqaLasRpegppslRiTgvgspesgskeeleetgerLakfAeelgvpfefnvlvakrledle 190
                     +++NqaI ea+ege++vHiiD++  +++QW++L+q+++ Rpegpp+lRiTg+++    +ke le+++  L++ Ae+l++pf+fn+ ++ +le+l+
  XP_022764937.1 138 VITNQAIIEAMEGEKMVHIIDLNSCEPAQWINLFQTFSVRPEGPPHLRITGIHE----QKEVLEQMALWLTEEAEKLDIPFQFNP-IVCKLENLD 227
                     ******************************************************....9**************************.5788***** PP

            GRAS 191 leeLrvkpgEalaVnlvlqlhrll...........................................................desvsles..er 224
                     le+Lrvk+gEalaV++vlqlh+ll                                                           ++++sl+   + 
  XP_022764937.1 228 LESLRVKTGEALAVSSVLQLHSLLatddemrrrnnnspslsknlnsnqshrilqmnqrtlgewlekepvhiyspssdlatpspSSPLSLAPapKM 322
                     *********************************************************************************99666666555578 PP

            GRAS 225 devLklvkslsPkvvvvveqeadhnsesFlerflealeyysalfdsleaklpreseerikvErellgreivnvvacegaerrerhetlekWrerl 319
                      ++L +++ lsPk++vv+eqe++hn+++++er++eal++y+alfd+le++++r++ er+kvE++l+g+ei+n++aceg er+erhe+l kW  rl
  XP_022764937.1 323 GSFLTALRALSPKLMVVTEQESNHNGPTLMERVMEALNFYAALFDCLESTVSRAQLERQKVEKMLFGEEIKNIIACEGLERKERHEKLDKWILRL 417
                     89********************************************************************************************* PP

            GRAS 320 eeaGFkpvplsekaakqaklllrkvksdgyrveeesgslvlgWkdrpLvsvSaW 373
                     e aGF +vpls++ + qa +ll++ + dgy+++ee+g+lv++W++rpL+s+SaW
  XP_022764937.1 418 ELAGFVKVPLSYHGMLQAGRLLQTNNYDGYNIKEENGCLVMCWQERPLYSMSAW 471
                     ****************************************************** PP
Sequence ? help Back to Top
Protein Sequence    Length: 472 aa     Download sequence    
MIQEGRTSVT SSPLQFFPWM SLSPGLGSPF PWLRELKSEE RGLCLIHLLV ACANHVAAGS  60
LENANFGLEQ ISHLASPDGD TMQRIAAYFT EALADRMLKA WPGLHKALNS TKISSVSEEI  120
LVQKLFFELC PFLKIAYVIT NQAIIEAMEG EKMVHIIDLN SCEPAQWINL FQTFSVRPEG  180
PPHLRITGIH EQKEVLEQMA LWLTEEAEKL DIPFQFNPIV CKLENLDLES LRVKTGEALA  240
VSSVLQLHSL LATDDEMRRR NNNSPSLSKN LNSNQSHRIL QMNQRTLGEW LEKEPVHIYS  300
PSSDLATPSP SSPLSLAPAP KMGSFLTALR ALSPKLMVVT EQESNHNGPT LMERVMEALN  360
FYAALFDCLE STVSRAQLER QKVEKMLFGE EIKNIIACEG LERKERHEKL DKWILRLELA  420
GFVKVPLSYH GMLQAGRLLQ TNNYDGYNIK EENGCLVMCW QERPLYSMSA WG
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G50420.10.0GRAS family protein