PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_022764374.1

Organism

Durio zibethinus

Taxonomic ID

66656

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Malvales; Malvaceae; Helicteroideae; Durio

Family

Trihelix

Protein Properties

Length: 342aa MW: 37772 Da PI: 10.0268

Description

Trihelix family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_022764374.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	trihelix	51.6	2.5e-16	53	136	1	86
trihelix 1 rWtkqevlaLiearremeerlrrgklkkplWeevskkm....rergferspkqCkekwenlnkrykkikegekkrtsessstcpyfdqle 86 +W++ v L+ea+++++ +r+klk+++We+v++++ ++ ++++qCk+k+e+++kry+ + +++ + s++p++ +l+ XP_022764374.1 53 EWSEGAVSSLLEAYENKWVLRNRAKLKGHDWEDVARYVsaraNCTKSPKTQTQCKNKIESMKKRYRSESATADG------SSWPLYPRLD 136 5***********************************844444455556679**************99997......4699999986 PP

Sequence ? help Back to Top
Protein Sequence Length: 342 aa Download sequence
MDKETNQENP SLLSNNNITK EDCSPKKHPG NTAVIGGGVG GGGGGNDRLK RDEWSEGAVS 60 SLLEAYENKW VLRNRAKLKG HDWEDVARYV SARANCTKSP KTQTQCKNKI ESMKKRYRSE 120 SATADGSSWP LYPRLDLLLR GSAPPPPPPQ LHPLTVPQPP ASLPTNPPLT LPEPSMVVML 180 QQQQPPPPPL ASQVPGTAQN SHGSNGVDRI LKEDGAGTKL SDHLSDKIAM ETDSSTPALY 240 SDKQKLGSKK LKMKMEKKKR RKKEEWEIGE SIRWLAEVVL KSEQARMETM REIEKMRAEA 300 EAKRGEMDLK RAEIIANTQL EIARLFAGSS KGVDSSLRIG RN

Sequence ? help Back to Top

Protein Sequence Length: 342 aa Download sequence

MDKETNQENP SLLSNNNITK EDCSPKKHPG NTAVIGGGVG GGGGGNDRLK RDEWSEGAVS  60
SLLEAYENKW VLRNRAKLKG HDWEDVARYV SARANCTKSP KTQTQCKNKI ESMKKRYRSE  120
SATADGSSWP LYPRLDLLLR GSAPPPPPPQ LHPLTVPQPP ASLPTNPPLT LPEPSMVVML  180
QQQQPPPPPL ASQVPGTAQN SHGSNGVDRI LKEDGAGTKL SDHLSDKIAM ETDSSTPALY  240
SDKQKLGSKK LKMKMEKKKR RKKEEWEIGE SIRWLAEVVL KSEQARMETM REIEKMRAEA  300
EAKRGEMDLK RAEIIANTQL EIARLFAGSS KGVDSSLRIG RN

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	249	260	KKLKMKMEKKKR
2	250	263	KLKMKMEKKKRRKK
3	257	261	KKKRR
4	257	262	KKKRRK
5	257	263	KKKRRKK
6	258	262	KKRRK
7	258	263	KKRRKK

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G54390.1	7e-58	Trihelix family protein