PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_022763638.1

Organism

Durio zibethinus

Taxonomic ID

66656

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Malvales; Malvaceae; Helicteroideae; Durio

Family

GATA

Protein Properties

Length: 868aa MW: 93082.5 Da PI: 9.2661

Description

GATA family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_022763638.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	GATA	48.9	9.1e-16	778	814	1	35
GATA 1 CsnCgttk..TplWRrgpdgnktLCnaCGlyyrkkgl 35 C++Cg ++ Tp++Rrgp g++tLCnaCGl+++ kg+ XP_022763638.1 778 CTHCGISSkkTPMMRRGPAGPRTLCNACGLKWANKGV 814 ***88888**********************997 PP

Sequence ? help Back to Top
Protein Sequence Length: 868 aa Download sequence
MGSTFLSIPT KRAMPDPTAS SNGPSKRSKP PSTPLCIRPA HVAFRLLCHV SRVGGIIGKS 60 GSVIKQLQQV TGSKIRIEDA PAESPDRVIT VVGPSAVNTK IMLNIGSLGN GDDSRVEEID 120 VSKAQEALVR VFERILEVAA ESNGAALGMV SCRLLAEVKQ VGSVIGKGGK VVEKIREDTG 180 TKIRVLTDKL PACAGPTEEI VEIEGGVLAV KKALVAVSHR LQDCPPVNKT KVTENRTIES 240 VLPETLHRPI ELLPEETLHR PIDLLPKETL HRPIDLLPQE TLRRPIDLLP RETLRRPIEE 300 ALSDLHVDHL SQRSSLVPSI PGSSISYATR AHPLSLESEK APPLDTKTMQ QEVVFKILCP 360 SGRVGGVIGK GGAIIKALQS DTGATITIGA TITDCDERLI TVTASENPES RYSPAQKAVV 420 LVFVRAFEAS IEKGLDSGSG KVSNVTTRVV VPSSQVGCLL GKGGAIISEM RKATGTIMRI 480 LGTDQVPKCV TENDQVVQIS GGYLNVRDAI YHVTGRLREN LFSTTLKSAG AKSSSLVLTE 540 TSPYERLLDA TPFGLQVLSG VSHSLSRHTT LALNRMDPLG LSHSSDRPRS PGLWTSEQMA 600 TGLNPRNIVD IGRGLTSFRG GFELCSGNKS AIVTNTTVEI RVPENVIDSV YGENGRNLAR 660 LREVQEVLLL LGGYEIPSGI PALGTVSVTQ RGMGDFPGRS IQPQRAASLN RFREKRKERC 720 FDKKIRYTVR KEVALRMQRK KGQFTSSKAI SDEVASASSG WSGAAGSGQD ESMQEILCTH 780 CGISSKKTPM MRRGPAGPRT LCNACGLKWA NKGVLRDLSK VSTAANQDPT AKTTEQNDAE 840 ASESEGVTLT TDVVSLSNGD NSAVTAER

Sequence ? help Back to Top

Protein Sequence Length: 868 aa Download sequence

MGSTFLSIPT KRAMPDPTAS SNGPSKRSKP PSTPLCIRPA HVAFRLLCHV SRVGGIIGKS  60
GSVIKQLQQV TGSKIRIEDA PAESPDRVIT VVGPSAVNTK IMLNIGSLGN GDDSRVEEID  120
VSKAQEALVR VFERILEVAA ESNGAALGMV SCRLLAEVKQ VGSVIGKGGK VVEKIREDTG  180
TKIRVLTDKL PACAGPTEEI VEIEGGVLAV KKALVAVSHR LQDCPPVNKT KVTENRTIES  240
VLPETLHRPI ELLPEETLHR PIDLLPKETL HRPIDLLPQE TLRRPIDLLP RETLRRPIEE  300
ALSDLHVDHL SQRSSLVPSI PGSSISYATR AHPLSLESEK APPLDTKTMQ QEVVFKILCP  360
SGRVGGVIGK GGAIIKALQS DTGATITIGA TITDCDERLI TVTASENPES RYSPAQKAVV  420
LVFVRAFEAS IEKGLDSGSG KVSNVTTRVV VPSSQVGCLL GKGGAIISEM RKATGTIMRI  480
LGTDQVPKCV TENDQVVQIS GGYLNVRDAI YHVTGRLREN LFSTTLKSAG AKSSSLVLTE  540
TSPYERLLDA TPFGLQVLSG VSHSLSRHTT LALNRMDPLG LSHSSDRPRS PGLWTSEQMA  600
TGLNPRNIVD IGRGLTSFRG GFELCSGNKS AIVTNTTVEI RVPENVIDSV YGENGRNLAR  660
LREVQEVLLL LGGYEIPSGI PALGTVSVTQ RGMGDFPGRS IQPQRAASLN RFREKRKERC  720
FDKKIRYTVR KEVALRMQRK KGQFTSSKAI SDEVASASSG WSGAAGSGQD ESMQEILCTH  780
CGISSKKTPM MRRGPAGPRT LCNACGLKWA NKGVLRDLSK VSTAANQDPT AKTTEQNDAE  840
ASESEGVTLT TDVVSLSNGD NSAVTAER

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G51600.2	4e-51	GATA family protein