PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_022762480.1
Organism
Durio zibethinus
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Malvales; Malvaceae; Helicteroideae; Durio
Family GRAS
Protein Properties Length: 445aa    MW: 49223.8 Da    PI: 5.5887
Description GRAS family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_022762480.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1GRAS295.61.3e-90444382373
            GRAS   2 velLlecAeavssgdlelaqalLarlselaspdgdpmqRlaayfteALaarlarsvselykalppsetseknsseelaalkl..fsevsPilkfs 94 
                     ++lLl+cA a++s+d +laq++++ l++ as+ gdp+qRl++ f++AL +r +r ++++++    s++      +++++++l  ++++ P+++f+
  XP_022762480.1  44 EKLLLHCASALESNDVTLAQQVMWVLNNVASSVGDPNQRLTSWFLRALISRASRVCPTTMNFNGGSTS----LRRRMTVTELagYVDLIPWHRFG 134
                     589***************************************************99988876644444....4455555555569********** PP

            GRAS  95 hltaNqaIleavegeervHiiDfdisqGlQWpaLlqaLasRpegppslRiTgvgspesg...skeeleetgerLakfAeelgvpfefnvl..... 181
                     + + N+aIl+av+g+ +vHi+Df+i ++++ p+L++aLa+R+egppslRiT+ +   ++    + ++e +g+rLa+fA+  +vpfef+v+     
  XP_022762480.1 135 FCVSNSAILKAVQGSPKVHILDFSIAHCMHLPTLIDALAKRAEGPPSLRITVPSCRPPVpplLNASTEDVGHRLANFAKFRDVPFEFHVIddpcl 229
                     ***************************************************97776566779999****************************** PP

            GRAS 182 ...............vakrledleleeLrvkpgEalaVnlvlqlhrlldesvsles....erdevLklvkslsPkvvvvveqeadhnsesFlerf 257
                                     ++ l+ l+  eL+++++Eal++n++  lh+l de+  ++      rd++L+++k+l+P+++vvv++++d++++s+  r+
  XP_022762480.1 230 sssgeilskessafqFESLLSLLTATELELREDEALVINCQNWLHYLSDEREGSTArdssLRDAFLDIIKGLNPRIIVVVDEDSDLSASSLTSRI 324
                     *999997777666655556666788888********************9865443334459********************************** PP

            GRAS 258 lealeyysalfdsleaklpreseerikvErellgreivnvvacegaerrerhetlekWrerleeaGFkpvplsekaakqaklllrkvksdgyrve 352
                     + +++y +  fd+le+ lp++s++r  +E   +g +i+n+++ eg++r+er e+ +k ++r++++GF +vp+ e++++++k+ll +++  g+ ++
  XP_022762480.1 325 TTCFNYLWIPFDALETFLPKDSNQRLEYESD-IGHKIENIISFEGFQRIERLESGAKLSQRMKSSGFFSVPFCEETVAEVKSLLDEHA-SGWGMK 417
                     *******************************.********************************************************.8999** PP

            GRAS 353 eesgslvlgWkdrpLvsvSaW 373
                      e++ lvl+Wk+++ v+++aW
  XP_022762480.1 418 REDNMLVLTWKGHNSVFATAW 438
                     ********************* PP
Sequence ? help Back to Top
Protein Sequence    Length: 445 aa     Download sequence    
MKTEVRGNGT SISLQNPSHF NTPHGSITGA LRGCLGSLDG ACTEKLLLHC ASALESNDVT  60
LAQQVMWVLN NVASSVGDPN QRLTSWFLRA LISRASRVCP TTMNFNGGST SLRRRMTVTE  120
LAGYVDLIPW HRFGFCVSNS AILKAVQGSP KVHILDFSIA HCMHLPTLID ALAKRAEGPP  180
SLRITVPSCR PPVPPLLNAS TEDVGHRLAN FAKFRDVPFE FHVIDDPCLS SSGEILSKES  240
SAFQFESLLS LLTATELELR EDEALVINCQ NWLHYLSDER EGSTARDSSL RDAFLDIIKG  300
LNPRIIVVVD EDSDLSASSL TSRITTCFNY LWIPFDALET FLPKDSNQRL EYESDIGHKI  360
ENIISFEGFQ RIERLESGAK LSQRMKSSGF FSVPFCEETV AEVKSLLDEH ASGWGMKRED  420
NMLVLTWKGH NSVFATAWAS TGLED
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G49950.11e-117GRAS family protein