PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_022761579.1

Organism

Durio zibethinus

Taxonomic ID

66656

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Malvales; Malvaceae; Helicteroideae; Durio

Family

GRAS

Protein Properties

Length: 1430aa MW: 163556 Da PI: 5.6629

Description

GRAS family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_022761579.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	GRAS	28.6	1.7e-09	7	65	3	60
GRAS 3 elLlecAeavssgdlelaqalLarlselaspdg.dpmqRlaayfteALaarlarsvsel 60 ++L+ cA+a+++g+l+la++lL+ + +las++ + ++++yf+eAL +r+ + +++ XP_022761579.1 7 KALVVCAQAIQDGNLKLADSLLELIWNLASEESdEQQSKVVKYFAEALVRRVCGLHPSV 65 789***********************9999856888************9866655 PP
2	GRAS	136.6	2.6e-42	80	342	98	374
GRAS 98 aNqaIleavegeervHiiDfdis..qGlQ.WpaLlqaLasRpegppslRiTgvgspesgskeeleetgerLakfAeelgvpfe..fnvlvakrle 187 + a+ v +++r+H iDf+i +G Q W L+ aL+sR ++p s+R+ ++ +p +++ ++++ + rL + A+ +v++e +v++a++l XP_022761579.1 80 TGDAVNTVVTRKKRLHLIDFNIPhlYGWQpWEYLFGALNSRYADPLSVRVSVILPPFLKESVNIQQEKPRLLEWARDSKVELEddLKVVYANSLG 174 56799999************62269888999******************9999*****************9975578899* PP GRAS 188 dleleeLrvkp..gEalaVnlvlqlhrlldesvsleserdevLklvkslsPkvvvvveqeadhnsesFlerflealeyysalfdsleaklprese 280 +++ ++L++++ +Ea++V +++l+ ll + +++e L +++++P++v ++eq+a+ n+ +F +r+ ++++yys f + XP_022761579.1 175 EMDASMLDFRRseDEAVVVFYIFKLQMLLVDAGAMER----ELLKLRQINPEIVMIMEQDANNNDFNFIKRLEDSFQYYSHAFRFDGDS------ 259 *****9999************99999999....55568*********************************766555...... PP GRAS 281 erikvErellgreivnvvacegaerrerhetlekWrerleeaGFkpvplsekaakqaklllrkvksdgyrveeesgslvlgWkdrpLvsvSaWr 374 + +E+ +r+i+++v ceg++r+ rhetl++Wr+rl + GF pvpl+ + ++l++ ++ +++ee+g+ v++ + p++++SaW+ XP_022761579.1 260 -YQEMEND-YRRQIMSIVGCEGKDRIVRHETLGQWRSRLLTYGFLPVPLEAT-----SMLVSVYD----EIHEENGCWVFCEGNLPMFFISAWK 342 .5778888.79*********************************9754.....44555555....59********************8 PP

Sequence ? help Back to Top
Protein Sequence Length: 1430 aa Download sequence
MGSSALKALV VCAQAIQDGN LKLADSLLEL IWNLASEESD EQQSKVVKYF AEALVRRVCG 60 LHPSVRYNLQ WLPYAFTCLT GDAVNTVVTR KKRLHLIDFN IPHLYGWQPW EYLFGALNSR 120 YADPLSVRVS VILPPFLKES VNIQQEKPRL LEWARDSKVE LEDDLKVVYA NSLGEMDASM 180 LDFRRSEDEA VVVFYIFKLQ MLLVDAGAME RELLKLRQIN PEIVMIMEQD ANNNDFNFIK 240 RLEDSFQYYS HAFRFDGDSY QEMENDYRRQ IMSIVGCEGK DRIVRHETLG QWRSRLLTYG 300 FLPVPLEATS MLVSVYDEIH EENGCWVFCE GNLPMFFISA WKVRQWEDHF NLISDNFVQG 360 FNPIPTSEDK IQPLQLLRES FSLNRLAAFA EIYDMLDDVC FKYKLTLALT WACGVNVKQN 420 LDGITSDPYK KDILCIESAY SYVNDEESQQ FMRRCAKQNH LLGGQAIVGK ALQSNEPFLF 480 ESSIAKPEKC DNQFAIVARE FGPHAALAIC LQNHCNDVYV VEFFLPLTEG KLEKPESMAL 540 DIFNDLKNMK KMFVTLRVHG TEVGFQEEAT SNIRQVTMSM QNLSPASSTN DFLNSNTTRP 600 LNTFEARDGH VELERQGFNE QGTMASCSNQ LGMATIGFSS VSIHASSVGG ICPFNAPKPV 660 GYDGVLETQG TWKQEIKKKN CVSQTISNGN NNIVKVNKVC TIPRTKQRKL VSDVWKDFIK 720 FEVDGKQWAK CNHCHKKFTG SSKSGTTHLK NHLERCPIKK SECQERQLKF PAETGDSTTQ 780 DTNERNSTFD QERSRLDLVK MIIKHQFPLD TAELEFFKNF VKNLQPMFEF QSQAIILSDI 840 HRIYEVEKEK LKQYLDQLAC NFSLTISMWK DNPRKIAYCC LIAHFIDDGW ELKAKIIAFK 900 ILEHSYDTGT LIGIIRSSIL EWNMSKKVCS ITVDNSSLKD DLVQQIKEAC LSDQGSLLSS 960 HCFISCSLIQ DGLHEIDDIV SKMRKSIEYI SETAHGKLKF QEAVNQVKLK VGKSRDDLPL 1020 RLDSDFGILD CALELREIFC QMEQIDGSFR VNPSMEEWDK AIALHSCLKG FYDILSSFEG 1080 IQSLTANLYF PKLCNIYKKF LQLEKSSYPF VSSMKRKFDN YWSLCNLVFT VAVVLDPRLK 1140 FKFVEFSYSE IYGRDSKMQL NKFHKVLMEV YHEYADEPRI LTTSASDFGD FGCSTGQSTQ 1200 IANDCILDSF SKFASAGNFN ELASWKSELD CYLDEPLLRL DETSFDILGW WRVNSERFPT 1260 LGRMAHDLLA MPVSIVPPCS DLSAVITNPA YSSLNPESLE ALACSQNWLE MSKGSGRANH 1320 VPQQNMAKRK MEEKETHALK NFQREGMAPL KSSEPNHGRN ISGLIEIPNG GPSSDNESEF 1380 QCFSSESDGE VAWREHGEWH EEDIRAYLIS DFTEKESKRL KRWQSHEMKN

Sequence ? help Back to Top

Protein Sequence Length: 1430 aa Download sequence

MGSSALKALV VCAQAIQDGN LKLADSLLEL IWNLASEESD EQQSKVVKYF AEALVRRVCG  60
LHPSVRYNLQ WLPYAFTCLT GDAVNTVVTR KKRLHLIDFN IPHLYGWQPW EYLFGALNSR  120
YADPLSVRVS VILPPFLKES VNIQQEKPRL LEWARDSKVE LEDDLKVVYA NSLGEMDASM  180
LDFRRSEDEA VVVFYIFKLQ MLLVDAGAME RELLKLRQIN PEIVMIMEQD ANNNDFNFIK  240
RLEDSFQYYS HAFRFDGDSY QEMENDYRRQ IMSIVGCEGK DRIVRHETLG QWRSRLLTYG  300
FLPVPLEATS MLVSVYDEIH EENGCWVFCE GNLPMFFISA WKVRQWEDHF NLISDNFVQG  360
FNPIPTSEDK IQPLQLLRES FSLNRLAAFA EIYDMLDDVC FKYKLTLALT WACGVNVKQN  420
LDGITSDPYK KDILCIESAY SYVNDEESQQ FMRRCAKQNH LLGGQAIVGK ALQSNEPFLF  480
ESSIAKPEKC DNQFAIVARE FGPHAALAIC LQNHCNDVYV VEFFLPLTEG KLEKPESMAL  540
DIFNDLKNMK KMFVTLRVHG TEVGFQEEAT SNIRQVTMSM QNLSPASSTN DFLNSNTTRP  600
LNTFEARDGH VELERQGFNE QGTMASCSNQ LGMATIGFSS VSIHASSVGG ICPFNAPKPV  660
GYDGVLETQG TWKQEIKKKN CVSQTISNGN NNIVKVNKVC TIPRTKQRKL VSDVWKDFIK  720
FEVDGKQWAK CNHCHKKFTG SSKSGTTHLK NHLERCPIKK SECQERQLKF PAETGDSTTQ  780
DTNERNSTFD QERSRLDLVK MIIKHQFPLD TAELEFFKNF VKNLQPMFEF QSQAIILSDI  840
HRIYEVEKEK LKQYLDQLAC NFSLTISMWK DNPRKIAYCC LIAHFIDDGW ELKAKIIAFK  900
ILEHSYDTGT LIGIIRSSIL EWNMSKKVCS ITVDNSSLKD DLVQQIKEAC LSDQGSLLSS  960
HCFISCSLIQ DGLHEIDDIV SKMRKSIEYI SETAHGKLKF QEAVNQVKLK VGKSRDDLPL  1020
RLDSDFGILD CALELREIFC QMEQIDGSFR VNPSMEEWDK AIALHSCLKG FYDILSSFEG  1080
IQSLTANLYF PKLCNIYKKF LQLEKSSYPF VSSMKRKFDN YWSLCNLVFT VAVVLDPRLK  1140
FKFVEFSYSE IYGRDSKMQL NKFHKVLMEV YHEYADEPRI LTTSASDFGD FGCSTGQSTQ  1200
IANDCILDSF SKFASAGNFN ELASWKSELD CYLDEPLLRL DETSFDILGW WRVNSERFPT  1260
LGRMAHDLLA MPVSIVPPCS DLSAVITNPA YSSLNPESLE ALACSQNWLE MSKGSGRANH  1320
VPQQNMAKRK MEEKETHALK NFQREGMAPL KSSEPNHGRN ISGLIEIPNG GPSSDNESEF  1380
QCFSSESDGE VAWREHGEWH EEDIRAYLIS DFTEKESKRL KRWQSHEMKN

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT2G01570.1	7e-51	GRAS family protein