PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_022761559.1
Organism
Durio zibethinus
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Malvales; Malvaceae; Helicteroideae; Durio
Family ARF
Protein Properties Length: 681aa    MW: 76030.9 Da    PI: 6.787
Description ARF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_022761559.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1B376.82.3e-24114214198
                     EEEE-..-HHHHTT-EE--HHH.HTT.....---..--SEEEEEETTS-EEEEEE..EEETTEEEE-TTHHHHHHHHT--TT-EEEEEE-SSSEE CS
              B3   1 ffkvltpsdvlksgrlvlpkkfaeeh.....ggkkeesktltledesgrsWevkliyrkksgryvltkGWkeFvkangLkegDfvvFkldgrsef 90 
                     f+kvlt sd++++g +++ +k+a+e+     +++ + +++l+ +d++g +W++k+i+r++++r++lt+GW+ Fv +++L +gD++vF   + +++
  XP_022761559.1 114 FCKVLTASDTSTHGGFSVLRKHATEClppldMNQATPTQELVAKDLHGYEWRFKHIFRGQPRRHLLTTGWSTFVTSKRLVAGDSFVFL--RGENG 206
                     99****************************9555556679************************************************..44999 PP

                     ..EEEEE- CS
              B3  91 elvvkvfr 98 
                     el+v+v+r
  XP_022761559.1 207 ELRVGVRR 214
                     9*****98 PP
2Auxin_resp105.46.6e-35240319183
      Auxin_resp   1 aahaastksvFevvYnPrastseFvvkvekvekalkvkvsvGmRfkmafetedsserrlsGtvvgvsdldpvrWpnSkWrsLk 83 
                     a+ha+st++ F v+Y+Pr+  s+F++ ++k+++al++k++vGmRfkm+fe+eds+err+sGt+vg++d++p +W++SkWrsLk
  XP_022761559.1 240 ASHAVSTQTLFVVYYKPRT--SQFIIGLNKYLEALNNKFAVGMRFKMKFEGEDSPERRFSGTIVGLEDFSP-HWKDSKWRSLK 319
                     789***************6..9*************************************************.*********96 PP
Sequence ? help Back to Top
Protein Sequence    Length: 681 aa     Download sequence    
MIGNGGDDLY MELWKLCAGP LVEIPRANER VYYFPQGHME QLEASTNQEL NQRIPLFNLP  60
SKILCRVVHI QLLAEQETDE VYAQITLLPE PNQPNPTTPD ACPPESQRPS IQSFCKVLTA  120
SDTSTHGGFS VLRKHATECL PPLDMNQATP TQELVAKDLH GYEWRFKHIF RGQPRRHLLT  180
TGWSTFVTSK RLVAGDSFVF LRGENGELRV GVRRVACQQS SMPSSVISSQ SMHLGVLATA  240
SHAVSTQTLF VVYYKPRTSQ FIIGLNKYLE ALNNKFAVGM RFKMKFEGED SPERRFSGTI  300
VGLEDFSPHW KDSKWRSLKV QWDEPASIPR PDRVSPWEIE PFAAPVPPTL SQPVPAKNKR  360
PRPPEIPALD LTSTASALRN SGVLHSHDPT RRNITAEAKR NENHVMWHHK QTEINSSCSS  420
VLKTQNEGSW ISSPGMSASQ HLYPDAREDS KSVSGWPILS GFSNPQLNND STFDPIEKVK  480
KSETAASCRL FGIELINHSA SSTPLERTPT QLATMTAGTT EGRGLSTLSP TDSDQKSDIS  540
KDSKEKQQEQ LQVSAKEIHS RQSCSNSTRS CTKVQMQGLA VGRAVDLGML EGYNQLIDEL  600
EEMFNIKGEL RCKNKWEIVY TDDEGDMMLV GDDPWQEFCN MVRRIFICSS QDVKKMSTGS  660
KLPLASIEGQ GIVISSESAE N
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
1359363KRPRP
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G23980.10.0ARF family protein