PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_022761552.1
Organism
Durio zibethinus
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Malvales; Malvaceae; Helicteroideae; Durio
Family ARF
Protein Properties Length: 697aa    MW: 77654.6 Da    PI: 6.6922
Description ARF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_022761552.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1B376.82.4e-24130230198
                     EEEE-..-HHHHTT-EE--HHH.HTT.....---..--SEEEEEETTS-EEEEEE..EEETTEEEE-TTHHHHHHHHT--TT-EEEEEE-SSSEE CS
              B3   1 ffkvltpsdvlksgrlvlpkkfaeeh.....ggkkeesktltledesgrsWevkliyrkksgryvltkGWkeFvkangLkegDfvvFkldgrsef 90 
                     f+kvlt sd++++g +++ +k+a+e+     +++ + +++l+ +d++g +W++k+i+r++++r++lt+GW+ Fv +++L +gD++vF   + +++
  XP_022761552.1 130 FCKVLTASDTSTHGGFSVLRKHATEClppldMNQATPTQELVAKDLHGYEWRFKHIFRGQPRRHLLTTGWSTFVTSKRLVAGDSFVFL--RGENG 222
                     99****************************9555556679************************************************..44999 PP

                     ..EEEEE- CS
              B3  91 elvvkvfr 98 
                     el+v+v+r
  XP_022761552.1 223 ELRVGVRR 230
                     9*****98 PP
2Auxin_resp105.46.8e-35256335183
      Auxin_resp   1 aahaastksvFevvYnPrastseFvvkvekvekalkvkvsvGmRfkmafetedsserrlsGtvvgvsdldpvrWpnSkWrsLk 83 
                     a+ha+st++ F v+Y+Pr+  s+F++ ++k+++al++k++vGmRfkm+fe+eds+err+sGt+vg++d++p +W++SkWrsLk
  XP_022761552.1 256 ASHAVSTQTLFVVYYKPRT--SQFIIGLNKYLEALNNKFAVGMRFKMKFEGEDSPERRFSGTIVGLEDFSP-HWKDSKWRSLK 335
                     789***************6..9*************************************************.*********96 PP
Sequence ? help Back to Top
Protein Sequence    Length: 697 aa     Download sequence    
MMVNMGGSLS QTNNVSSEGN GGDDLYMELW KLCAGPLVEI PRANERVYYF PQGHMEQLEA  60
STNQELNQRI PLFNLPSKIL CRVVHIQLLA EQETDEVYAQ ITLLPEPNQP NPTTPDACPP  120
ESQRPSIQSF CKVLTASDTS THGGFSVLRK HATECLPPLD MNQATPTQEL VAKDLHGYEW  180
RFKHIFRGQP RRHLLTTGWS TFVTSKRLVA GDSFVFLRGE NGELRVGVRR VACQQSSMPS  240
SVISSQSMHL GVLATASHAV STQTLFVVYY KPRTSQFIIG LNKYLEALNN KFAVGMRFKM  300
KFEGEDSPER RFSGTIVGLE DFSPHWKDSK WRSLKVQWDE PASIPRPDRV SPWEIEPFAA  360
PVPPTLSQPV PAKNKRPRPP EIPALDLTST ASALRNSGVL HSHDPTRRNI TAEAKRNENH  420
VMWHHKQTEI NSSCSSVLKT QNEGSWISSP GMSASQHLYP DAREDSKSVS GWPILSGFSN  480
PQLNNDSTFD PIEKVKKSET AASCRLFGIE LINHSASSTP LERTPTQLAT MTAGTTEGRG  540
LSTLSPTDSD QKSDISKDSK EKQQEQLQVS AKEIHSRQSC SNSTRSCTKV QMQGLAVGRA  600
VDLGMLEGYN QLIDELEEMF NIKGELRCKN KWEIVYTDDE GDMMLVGDDP WQEFCNMVRR  660
IFICSSQDVK KMSTGSKLPL ASIEGQGIVI SSESAEN
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
1375379KRPRP
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G23980.10.0ARF family protein