PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_022759402.1

Organism

Durio zibethinus

Taxonomic ID

66656

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Malvales; Malvaceae; Helicteroideae; Durio

Family

ARF

Protein Properties

Length: 777aa MW: 86282.1 Da PI: 5.8758

Description

ARF family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_022759402.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	B3	68.4	1e-21	127	219	1	88
EEEE-..-HHHHTT-EE--HHH.HTT.......---..--SEEEEEETTS-EEEEEE..EEETTEEEE-TTHHHHHHHHT--TT-EEEEEE-SSS CS B3 1 ffkvltpsdvlksgrlvlpkkfaeeh.......ggkkeesktltledesgrsWevkliyrkksgryvltkGWkeFvkangLkegDfvvFkldgrs 88 f+k+lt sd++++g +++p++ ae+ +++++ ++l+ +d++ +W++++i+r++++r++lt+GW+ Fv+a++L +gD+v+F + s XP_022759402.1 127 FCKTLTASDTSTHGGFSVPRRAAEKVfppldfsQQPPA--QELIARDLHDVEWKFRHIFRGQPKRHLLTTGWSVFVSAKRLVAGDSVLFIWASPS 219 99***************************8544444..48*********************************************854434 PP
2	Auxin_resp	87.5	2.6e-29	215	281	18	83
Auxin_resp 18 rastseFvvkvekvekalk.vkvsvGmRfkmafetedsserrlsGtvvgvsdldpvrWpnSkWrsLk 83 +as+seFv++++k++ka+ ++v vGmRf+m fete+ss rr++Gt++g+sdldpvrWpnS+Wrs+k XP_022759402.1 215 WASPSEFVIPLSKYVKAVFhTRVLVGMRFRMLFETEESSVRRYMGTITGISDLDPVRWPNSHWRSVK 281 689************87599****************************************985 PP

Sequence ? help Back to Top
Protein Sequence Length: 777 aa Download sequence
MKLSASGLGQ QAYEGENKCL NSELWHACAG PLVCLPTVGS RVVYFPQGHS EQVAATTNKE 60 VDAHIPNYPN LPPQLICQLH NVTMHADVET DEVYAQMTLQ PLTPEEQKDT FLPMDLGVPS 120 KQPTNYFCKT LTASDTSTHG GFSVPRRAAE KVFPPLDFSQ QPPAQELIAR DLHDVEWKFR 180 HIFRGQPKRH LLTTGWSVFV SAKRLVAGDS VLFIWASPSE FVIPLSKYVK AVFHTRVLVG 240 MRFRMLFETE ESSVRRYMGT ITGISDLDPV RWPNSHWRSV KVGWDESTAG ERQPRVSLWE 300 IEPLTTFPMY PSLFPLRLKR PWHPGSSSLH DNRDDISNGL MWLRGGSGEQ GLHSLNLQSF 360 SSFSWMQQRL DPSFPGNDHN LQYQAMLANG MQNLGSGDPL RQPLQQSLQF VQQPGSHNLL 420 LQQQLAVSQS VPHNIVQAQS QILNLPPVLG QEQVGTLPEE QAQQQHNIIQ SDQLQQRQPT 480 NMPQSFLKTD FIDSAKVSGS VPPVQNMLGS LCPESSANLL NFSRTGQSMP ADQLPQQSWA 540 PKYAHSQVIT FASSTSFPQV FPGKDAIKEP EIGHSDAQNS ALFGVNNNSY GLPLPTVMPG 600 FATSSSEADV PSIPLGDPSF QNPLYGCMQD SSELRSTGQV DPLNPTPTFV KVYKSGSVGR 660 SVDISRFSSY HELREELAQK FGIEGKLEDP LRSGWQLVFV DRENDILLLG DDPWEAFVNN 720 VWYIKILSAE DVQKMGEQRV EPFSPTPGQR MNSSGTATAS GGRDYVSGLS SVGSLEY

Sequence ? help Back to Top

Protein Sequence Length: 777 aa Download sequence

MKLSASGLGQ QAYEGENKCL NSELWHACAG PLVCLPTVGS RVVYFPQGHS EQVAATTNKE  60
VDAHIPNYPN LPPQLICQLH NVTMHADVET DEVYAQMTLQ PLTPEEQKDT FLPMDLGVPS  120
KQPTNYFCKT LTASDTSTHG GFSVPRRAAE KVFPPLDFSQ QPPAQELIAR DLHDVEWKFR  180
HIFRGQPKRH LLTTGWSVFV SAKRLVAGDS VLFIWASPSE FVIPLSKYVK AVFHTRVLVG  240
MRFRMLFETE ESSVRRYMGT ITGISDLDPV RWPNSHWRSV KVGWDESTAG ERQPRVSLWE  300
IEPLTTFPMY PSLFPLRLKR PWHPGSSSLH DNRDDISNGL MWLRGGSGEQ GLHSLNLQSF  360
SSFSWMQQRL DPSFPGNDHN LQYQAMLANG MQNLGSGDPL RQPLQQSLQF VQQPGSHNLL  420
LQQQLAVSQS VPHNIVQAQS QILNLPPVLG QEQVGTLPEE QAQQQHNIIQ SDQLQQRQPT  480
NMPQSFLKTD FIDSAKVSGS VPPVQNMLGS LCPESSANLL NFSRTGQSMP ADQLPQQSWA  540
PKYAHSQVIT FASSTSFPQV FPGKDAIKEP EIGHSDAQNS ALFGVNNNSY GLPLPTVMPG  600
FATSSSEADV PSIPLGDPSF QNPLYGCMQD SSELRSTGQV DPLNPTPTFV KVYKSGSVGR  660
SVDISRFSSY HELREELAQK FGIEGKLEDP LRSGWQLVFV DRENDILLLG DDPWEAFVNN  720
VWYIKILSAE DVQKMGEQRV EPFSPTPGQR MNSSGTATAS GGRDYVSGLS SVGSLEY

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G37020.1	0.0	ARF family protein