PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_022758850.1

Organism

Durio zibethinus

Taxonomic ID

66656

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Malvales; Malvaceae; Helicteroideae; Durio

Family

HB-other

Protein Properties

Length: 1172aa MW: 132247 Da PI: 8.0015

Description

HB-other family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_022758850.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Homeobox	36.1	1.1e-11	5	54	8	57
-HHHHHHHHHHHHHSSS--HHHHHHHHHHCTS-HHHHHHHHHHHHHHHHC CS Homeobox 8 tkeqleeLeelFeknrypsaeereeLAkklgLterqVkvWFqNrRakekk 57 ++ ql++Le+++e +yp+++e+e A+ lgLt +qVk WF +R ++k+ XP_022758850.1 5 SSLQLQALESFYEDVKYPTQREMEGYAAALGLTLKQVKGWFVEKRRRDKR 54 678********************************************997 PP

Sequence ? help Back to Top
Protein Sequence Length: 1172 aa Download sequence
MKRKSSLQLQ ALESFYEDVK YPTQREMEGY AAALGLTLKQ VKGWFVEKRR RDKRDNGIII 60 PIHSMEKLPA PKERNAAGIS AVRKNPKGRD LLVHNRSNSG AVLYSRYKSI FSENRFGKKK 120 KKILLPQDLL SPQYILKKVF RKDGPPLGVE FDSLPSRSFF HCKDSHPADQ DCQRGATKRR 180 KVSEFTTLDY QNNSNESAPM KKHGIGKGLM TVWRVVNPEG GNIPTGVDFS NHEIVPQTSS 240 PTVQKQPPRN KRRQPLVSLM KSADCNLPFQ KQRSLKKKLQ EKRKPSIKRR EVQSNKDDNH 300 RQPHKEKCDL ALEGSISNEL LDQLAMLVDD EELELRELQA GPNPLTCTDH LGTNGVLGCS 360 LCKDLLAKFP PNSVKMKQPF SMQPWDSSPE TVKKLFKVFH FLYTYSVTLD ICSFALDEFA 420 QAFHDKDSLL LGKIHVSLLK LLLCDIEAEL SASLLPHFSL SCKFLALLHS VENQEFLVKF 480 WKTSLNPLTW TEILRQVLVA AGFGSKQGLL RREALSKEMS LMARYGLSHG SLKGELFKIL 540 SERGNNGLTV SDLALSLPVT ELNLTSTTEE LNELICSTLS SDITLFEKIS PTAYRLRTSS 600 VAKDRYECHS DTEDSGSVDD DSDNSSGSSS SDNSECDSGN YYQRKLKHKN HHKSKNNMLT 660 VYTEIDESHP GEVWLLGLMD GEYSDLSIVE KLNALVALID LLSAGSSIRM ENPGKAIAEC 720 GPNIPHYGSG AKIKRSSSSR QKFPRPSWVY GGQKNGAQEA HASLDSQPVD SSSISKFFGK 780 GKCSSSGKDA KETEVGVDIH PMQSVFLGSD RRYNSYWLFL GPCNAYDPGH RRIYFESSED 840 GHWEVIDTEE ALRALLAVLD DRGKREAFLI ESLEKREASL CQEMSSRHLY DAGIRRMPSD 900 SSEMYVVRED SSSPVSDVDN LSLTVAVNES LTSCGAIVLE AGKKGEEQNR KWKRLQEFDV 960 WIWDCFYMNL NAVKHSKRSY LDSLTRCESC HDLYWRDEKH CRICHTTFEL DFDLEERYAI 1020 HVATCREKGD NSTFPKFKVL PSQLQSLKAA VHAIESVMPE DALIGAWTKS AHRLWVKRLR 1080 RTSSLSELLQ VVADFVAAIN ENWLNQCHIE QGGCTAIEEI IAFFPTMPQT SSAVALWLVK 1140 LDEFIAPYLK KVHSEKELEN ETRCSGRRAP KE

Sequence ? help Back to Top

Protein Sequence Length: 1172 aa Download sequence

MKRKSSLQLQ ALESFYEDVK YPTQREMEGY AAALGLTLKQ VKGWFVEKRR RDKRDNGIII  60
PIHSMEKLPA PKERNAAGIS AVRKNPKGRD LLVHNRSNSG AVLYSRYKSI FSENRFGKKK  120
KKILLPQDLL SPQYILKKVF RKDGPPLGVE FDSLPSRSFF HCKDSHPADQ DCQRGATKRR  180
KVSEFTTLDY QNNSNESAPM KKHGIGKGLM TVWRVVNPEG GNIPTGVDFS NHEIVPQTSS  240
PTVQKQPPRN KRRQPLVSLM KSADCNLPFQ KQRSLKKKLQ EKRKPSIKRR EVQSNKDDNH  300
RQPHKEKCDL ALEGSISNEL LDQLAMLVDD EELELRELQA GPNPLTCTDH LGTNGVLGCS  360
LCKDLLAKFP PNSVKMKQPF SMQPWDSSPE TVKKLFKVFH FLYTYSVTLD ICSFALDEFA  420
QAFHDKDSLL LGKIHVSLLK LLLCDIEAEL SASLLPHFSL SCKFLALLHS VENQEFLVKF  480
WKTSLNPLTW TEILRQVLVA AGFGSKQGLL RREALSKEMS LMARYGLSHG SLKGELFKIL  540
SERGNNGLTV SDLALSLPVT ELNLTSTTEE LNELICSTLS SDITLFEKIS PTAYRLRTSS  600
VAKDRYECHS DTEDSGSVDD DSDNSSGSSS SDNSECDSGN YYQRKLKHKN HHKSKNNMLT  660
VYTEIDESHP GEVWLLGLMD GEYSDLSIVE KLNALVALID LLSAGSSIRM ENPGKAIAEC  720
GPNIPHYGSG AKIKRSSSSR QKFPRPSWVY GGQKNGAQEA HASLDSQPVD SSSISKFFGK  780
GKCSSSGKDA KETEVGVDIH PMQSVFLGSD RRYNSYWLFL GPCNAYDPGH RRIYFESSED  840
GHWEVIDTEE ALRALLAVLD DRGKREAFLI ESLEKREASL CQEMSSRHLY DAGIRRMPSD  900
SSEMYVVRED SSSPVSDVDN LSLTVAVNES LTSCGAIVLE AGKKGEEQNR KWKRLQEFDV  960
WIWDCFYMNL NAVKHSKRSY LDSLTRCESC HDLYWRDEKH CRICHTTFEL DFDLEERYAI  1020
HVATCREKGD NSTFPKFKVL PSQLQSLKAA VHAIESVMPE DALIGAWTKS AHRLWVKRLR  1080
RTSSLSELLQ VVADFVAAIN ENWLNQCHIE QGGCTAIEEI IAFFPTMPQT SSAVALWLVK  1140
LDEFIAPYLK KVHSEKELEN ETRCSGRRAP KE

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	118	142	KKKKKILLPQDLLSPQYILKKVFRK
2	119	143	KKKKKILLPQDLLSPQYILKKVFRK

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G12750.1	0.0	HB-other family protein