PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_022758848.1

Organism

Durio zibethinus

Taxonomic ID

66656

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Malvales; Malvaceae; Helicteroideae; Durio

Family

HB-other

Protein Properties

Length: 1214aa MW: 137040 Da PI: 8.1269

Description

HB-other family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_022758848.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Homeobox	36	1.1e-11	57	106	8	57
-HHHHHHHHHHHHHSSS--HHHHHHHHHHCTS-HHHHHHHHHHHHHHHHC CS Homeobox 8 tkeqleeLeelFeknrypsaeereeLAkklgLterqVkvWFqNrRakekk 57 ++ ql++Le+++e +yp+++e+e A+ lgLt +qVk WF +R ++k+ XP_022758848.1 57 SSLQLQALESFYEDVKYPTQREMEGYAAALGLTLKQVKGWFVEKRRRDKR 106 678********************************************997 PP

Sequence ? help Back to Top
Protein Sequence Length: 1214 aa Download sequence
MIKPKTLLAV SKIFGTLSSL SPTLPISCFF FFFTSYLSLS RFLQTSYENV LEMKRKSSLQ 60 LQALESFYED VKYPTQREME GYAAALGLTL KQVKGWFVEK RRRDKRDNGI IIPIHSMEKL 120 PAPKERNAAG ISAVRKNPKG RDLLVHNRSN SGAVLYSRYK SIFSENRFGK KKKKILLPQD 180 LLSPQYILKK VFRKDGPPLG VEFDSLPSRS FFHCKDSHPA DQDCQRGATK RRKVSEFTTL 240 DYQNNSNESA PMKKHGIGKG LMTVWRVVNP EGGNIPTGVD FSNHEIVPQT SSPTVQKQPP 300 RNKRRQPLVS LMKQRSLKKK LQEKRKPSIK RREVQSNKDD NHRQPHKEKC DLALEGSISN 360 ELLDQLAMLV DDEELELREL QAGPNPLTCT DHLGTNGVLG CSLCKDLLAK FPPNSVKMKQ 420 PFSMQPWDSS PETVKKLFKV FHFLYTYSVT LDICSFALDE FAQAFHDKDS LLLGKIHVSL 480 LKLLLCDIEA ELSASLLPHF SLSCKFLALL HSVENQEFLV KFWKTSLNPL TWTEILRQVL 540 VAAGFGSKQG LLRREALSKE MSLMARYGLS HGSLKGELFK ILSERGNNGL TVSDLALSLP 600 VTELNLTSTT EELNELICST LSSDITLFEK ISPTAYRLRT SSVAKDRYEC HSDTEDSGSV 660 DDDSDNSSGS SSSDNSECDS GNYYQRKLKH KNHHKSKNNM LTVYTEIDES HPGEVWLLGL 720 MDGEYSDLSI VEKLNALVAL IDLLSAGSSI RMENPGKAIA ECGPNIPHYG SGAKIKRSSS 780 SRQKFPRPSW VYGGQKNGAQ EAHASLDSQP VDSSSISKFF GKGKCSSSGK DAKETEVGVD 840 IHPMQSVFLG SDRRYNSYWL FLGPCNAYDP GHRRIYFESS EDGHWEVIDT EEALRALLAV 900 LDDRGKREAF LIESLEKREA SLCQEMSSRH LYDAGIRRMP SDSSEMYVVR EDSSSPVSDV 960 DNLSLTVAVN ESLTSCGAIV LEAGKKGEEQ NRKWKRLQEF DVWIWDCFYM NLNAVKHSKR 1020 SYLDSLTRCE SCHDLYWRDE KHCRICHTTF ELDFDLEERY AIHVATCREK GDNSTFPKFK 1080 VLPSQLQSLK AAVHAIESVM PEDALIGAWT KSAHRLWVKR LRRTSSLSEL LQVVADFVAA 1140 INENWLNQCH IEQGGCTAIE EIIAFFPTMP QTSSAVALWL VKLDEFIAPY LKKVHSEKEL 1200 ENETRCSGRR APKE

Sequence ? help Back to Top

Protein Sequence Length: 1214 aa Download sequence

MIKPKTLLAV SKIFGTLSSL SPTLPISCFF FFFTSYLSLS RFLQTSYENV LEMKRKSSLQ  60
LQALESFYED VKYPTQREME GYAAALGLTL KQVKGWFVEK RRRDKRDNGI IIPIHSMEKL  120
PAPKERNAAG ISAVRKNPKG RDLLVHNRSN SGAVLYSRYK SIFSENRFGK KKKKILLPQD  180
LLSPQYILKK VFRKDGPPLG VEFDSLPSRS FFHCKDSHPA DQDCQRGATK RRKVSEFTTL  240
DYQNNSNESA PMKKHGIGKG LMTVWRVVNP EGGNIPTGVD FSNHEIVPQT SSPTVQKQPP  300
RNKRRQPLVS LMKQRSLKKK LQEKRKPSIK RREVQSNKDD NHRQPHKEKC DLALEGSISN  360
ELLDQLAMLV DDEELELREL QAGPNPLTCT DHLGTNGVLG CSLCKDLLAK FPPNSVKMKQ  420
PFSMQPWDSS PETVKKLFKV FHFLYTYSVT LDICSFALDE FAQAFHDKDS LLLGKIHVSL  480
LKLLLCDIEA ELSASLLPHF SLSCKFLALL HSVENQEFLV KFWKTSLNPL TWTEILRQVL  540
VAAGFGSKQG LLRREALSKE MSLMARYGLS HGSLKGELFK ILSERGNNGL TVSDLALSLP  600
VTELNLTSTT EELNELICST LSSDITLFEK ISPTAYRLRT SSVAKDRYEC HSDTEDSGSV  660
DDDSDNSSGS SSSDNSECDS GNYYQRKLKH KNHHKSKNNM LTVYTEIDES HPGEVWLLGL  720
MDGEYSDLSI VEKLNALVAL IDLLSAGSSI RMENPGKAIA ECGPNIPHYG SGAKIKRSSS  780
SRQKFPRPSW VYGGQKNGAQ EAHASLDSQP VDSSSISKFF GKGKCSSSGK DAKETEVGVD  840
IHPMQSVFLG SDRRYNSYWL FLGPCNAYDP GHRRIYFESS EDGHWEVIDT EEALRALLAV  900
LDDRGKREAF LIESLEKREA SLCQEMSSRH LYDAGIRRMP SDSSEMYVVR EDSSSPVSDV  960
DNLSLTVAVN ESLTSCGAIV LEAGKKGEEQ NRKWKRLQEF DVWIWDCFYM NLNAVKHSKR  1020
SYLDSLTRCE SCHDLYWRDE KHCRICHTTF ELDFDLEERY AIHVATCREK GDNSTFPKFK  1080
VLPSQLQSLK AAVHAIESVM PEDALIGAWT KSAHRLWVKR LRRTSSLSEL LQVVADFVAA  1140
INENWLNQCH IEQGGCTAIE EIIAFFPTMP QTSSAVALWL VKLDEFIAPY LKKVHSEKEL  1200
ENETRCSGRR APKE

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	170	194	KKKKKILLPQDLLSPQYILKKVFRK
2	171	195	KKKKKILLPQDLLSPQYILKKVFRK

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G12750.1	0.0	HB-other family protein