PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_022758499.1

Organism

Durio zibethinus

Taxonomic ID

66656

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Malvales; Malvaceae; Helicteroideae; Durio

Family

G2-like

Protein Properties

Length: 485aa MW: 53551.7 Da PI: 6.2377

Description

G2-like family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_022758499.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	G2-like	106	2.2e-33	261	315	1	55
G2-like 1 kprlrWtpeLHerFveaveqLGGsekAtPktilelmkvkgLtlehvkSHLQkYRl 55 kpr+rWtpeLHe Fveav+qLGGse+AtPk +l+l++v+gLt++hvkSHLQkYR+ XP_022758499.1 261 KPRMRWTPELHETFVEAVNQLGGSERATPKGVLKLIQVEGLTIYHVKSHLQKYRT 315 79****************************************************8 PP
2	Myb_DNA-binding	55.7	1.1e-17	263	314	1	48
TSSS-HHHHHHHHHHHHHTTTT...-HHHHHHHHT.TTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGgg...tWktIartmg.kgRtlkqcksrwqkyl 48 r+rWT+e++e +v+av+qlGg t+k + + ++ +g+t +++ks++qky+ XP_022758499.1 263 RMRWTPELHETFVEAVNQLGGSeraTPKGVLKLIQvEGLTIYHVKSHLQKYR 314 89****************99***************************7 PP

Sequence ? help Back to Top
Protein Sequence Length: 485 aa Download sequence
MEARPAISIE RSGARQLSKL GVSGGLTSSL PALSTHLEET YQKLPDTQQV SAERELMTRP 60 LVHATRIPTN CGVVGHIFSS SSGFSSDLHY SSASQHEKHS RNAPVISQSP TNAAALPLSH 120 LSNPTLPQST ISSHYNKENS GSWCTDPGFL DFPVSTPVQS SQVESNSCSG IITSEDFSKR 180 NDWQEWADQL ITDDDPLASN WNELLVDNII DLEPKMLYQV AKPCTTIPAQ KPQVHQQHPS 240 PSVESRSVAN PSSSANNAPA KPRMRWTPEL HETFVEAVNQ LGGSERATPK GVLKLIQVEG 300 LTIYHVKSHL QKYRTNRYKP ESSEGSSEKN LTPMEEISSL DLKMGMGITE ALRLQMEVQK 360 QLHEQLEIQR NLQLRIEEEG RHLQMMFEKQ KSGLDKLKVS PSNPENPPAA SDATKETPAK 420 SELEASQMDH VNSGTDNVNA KSMLARSSQE MGGEQKAHEN GDLERAKICV SESSSQHSKR 480 PRMEE

Sequence ? help Back to Top

Protein Sequence Length: 485 aa Download sequence

MEARPAISIE RSGARQLSKL GVSGGLTSSL PALSTHLEET YQKLPDTQQV SAERELMTRP  60
LVHATRIPTN CGVVGHIFSS SSGFSSDLHY SSASQHEKHS RNAPVISQSP TNAAALPLSH  120
LSNPTLPQST ISSHYNKENS GSWCTDPGFL DFPVSTPVQS SQVESNSCSG IITSEDFSKR  180
NDWQEWADQL ITDDDPLASN WNELLVDNII DLEPKMLYQV AKPCTTIPAQ KPQVHQQHPS  240
PSVESRSVAN PSSSANNAPA KPRMRWTPEL HETFVEAVNQ LGGSERATPK GVLKLIQVEG  300
LTIYHVKSHL QKYRTNRYKP ESSEGSSEKN LTPMEEISSL DLKMGMGITE ALRLQMEVQK  360
QLHEQLEIQR NLQLRIEEEG RHLQMMFEKQ KSGLDKLKVS PSNPENPPAA SDATKETPAK  420
SELEASQMDH VNSGTDNVNA KSMLARSSQE MGGEQKAHEN GDLERAKICV SESSSQHSKR  480
PRMEE

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G28610.1	1e-102	G2-like family protein