PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_022758082.1

Organism

Durio zibethinus

Taxonomic ID

66656

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Malvales; Malvaceae; Helicteroideae; Durio

Family

CO-like

Protein Properties

Length: 375aa MW: 42433.2 Da PI: 6.2307

Description

CO-like family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_022758082.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	zf-B_box	23.4	1.2e-07	10	53	2	39
zf-B_box 2 eerkCpeHeekelqlfCedCqqllCedClleeHkg......Htv 39 + r C+ +++ ++ l+C+ ++ lC +C e H+ H++ XP_022758082.1 10 QRRLCDYCNQSKALLYCRADSAKLCFSCDREVHSAnqlftkHSR 53 6789****99*******************65677777765 PP
2	zf-B_box	29.9	1.2e-09	55	98	4	42
zf-B_box 4 rkCpeHeekelqlfCedCqqllCedClleeHkg.....Htvvpl 42 C+ +++ ++++fCe+ q+ +C +C e Hk H+++p+ XP_022758082.1 55 LLCDACDNSPASIFCETEQSVFCSNCDWENHKFsssslHNRRPI 98 68*****************************8899999998886 PP
3	CCT	64	4.6e-22	331	373	1	43
CCT 1 ReaallRYkeKrktRkFeKkirYesRKavAesRpRvKGrFvkq 43 R+ a++RYkeKrktR+++K+irYesRK++AesR R+KGrF+k XP_022758082.1 331 RDSAISRYKEKRKTRRYDKHIRYESRKVRAESRTRIKGRFAKV 373 899**************************************96 PP

Sequence ? help Back to Top
Protein Sequence Length: 375 aa Download sequence
MTDRKINPKQ RRLCDYCNQS KALLYCRADS AKLCFSCDRE VHSANQLFTK HSRSLLCDAC 60 DNSPASIFCE TEQSVFCSNC DWENHKFSSS SLHNRRPIEG FTGCPSASEL VSFVGIEDLG 120 DKAPFFSEEK VGCGEDGEDD GLLYLLSWET PVTSGFDDLI VSNDFEHGFK PTDVPPLPKN 180 RNASCGQHKE EVLHQLRYLA KSEPNHSFVK TDVDAITGFQ PWITDTDNLQ PGIVHTSCKN 240 DTDPISFPAY ESSTPQCFSD NVEMADQVFL PFSQLRCYTE ESAVVPDKHL GSSRTTHENE 300 SLENQLQHQI AGGTMSALPK VAVHELNSQE RDSAISRYKE KRKTRRYDKH IRYESRKVRA 360 ESRTRIKGRF AKVDH

Sequence ? help Back to Top

Protein Sequence Length: 375 aa Download sequence

MTDRKINPKQ RRLCDYCNQS KALLYCRADS AKLCFSCDRE VHSANQLFTK HSRSLLCDAC  60
DNSPASIFCE TEQSVFCSNC DWENHKFSSS SLHNRRPIEG FTGCPSASEL VSFVGIEDLG  120
DKAPFFSEEK VGCGEDGEDD GLLYLLSWET PVTSGFDDLI VSNDFEHGFK PTDVPPLPKN  180
RNASCGQHKE EVLHQLRYLA KSEPNHSFVK TDVDAITGFQ PWITDTDNLQ PGIVHTSCKN  240
DTDPISFPAY ESSTPQCFSD NVEMADQVFL PFSQLRCYTE ESAVVPDKHL GSSRTTHENE  300
SLENQLQHQI AGGTMSALPK VAVHELNSQE RDSAISRYKE KRKTRRYDKH IRYESRKVRA  360
ESRTRIKGRF AKVDH

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT2G47890.1	1e-100	CO-like family protein