PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_022756985.1

Organism

Durio zibethinus

Taxonomic ID

66656

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Malvales; Malvaceae; Helicteroideae; Durio

Family

bHLH

Protein Properties

Length: 474aa MW: 51377.2 Da PI: 7.7476

Description

bHLH family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_022756985.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	HLH	51.1	2.3e-16	294	339	5	55
HHHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHHH CS HLH 5 hnerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksLq 55 hn+ Er+RRd+iN+++ +L++l+P++ K +Ka++L +++eY+k+Lq XP_022756985.1 294 HNQSERKRRDKINQRIKTLQKLVPNS-----SKTDKASMLDEVIEYLKHLQ 339 9**********************8.....7****************9 PP

Sequence ? help Back to Top
Protein Sequence Length: 474 aa Download sequence
MSQCVPSWDL DDNPVTANHS LRSNSYSTAP DVPMLEYEVA ELTWENGQLA MHSLGQSCVR 60 AKPLNSTSPS KYNWEKPRGN GTLESIVNQA TRFPYRMASL EGGGDELVPW FDQHRAAAVA 120 AASSATMTMD AVVPCSNRSE DRTTHVMESI SRLGAGTCVM GSSTREGSCS GAAGTQEDEV 180 LLTGKRARAA RVPAAPEWSG KEQSASASAT FGRDSQQVTV DTYEKDLGVG FTSTSLGSPE 240 NTSSARACTK ATTADDRDSV CHSRPQREIG EEYKKKETGK SSVSTKRSRA AAIHNQSERK 300 RRDKINQRIK TLQKLVPNSS KTDKASMLDE VIEYLKHLQA QVQMMSRMNL PPMMLPMTMQ 360 QQLQMSMMGM MGMGMGMGMG MGMGMGMGMG VMDMNTIGRP NINGISAVLP NPFMTMTSWD 420 GSGDRLQAAS AALMPDPLST FLACQSQPMT MDVYSRIAAL YQQMQQPPAS SSKS

Sequence ? help Back to Top

Protein Sequence Length: 474 aa Download sequence

MSQCVPSWDL DDNPVTANHS LRSNSYSTAP DVPMLEYEVA ELTWENGQLA MHSLGQSCVR  60
AKPLNSTSPS KYNWEKPRGN GTLESIVNQA TRFPYRMASL EGGGDELVPW FDQHRAAAVA  120
AASSATMTMD AVVPCSNRSE DRTTHVMESI SRLGAGTCVM GSSTREGSCS GAAGTQEDEV  180
LLTGKRARAA RVPAAPEWSG KEQSASASAT FGRDSQQVTV DTYEKDLGVG FTSTSLGSPE  240
NTSSARACTK ATTADDRDSV CHSRPQREIG EEYKKKETGK SSVSTKRSRA AAIHNQSERK  300
RRDKINQRIK TLQKLVPNSS KTDKASMLDE VIEYLKHLQA QVQMMSRMNL PPMMLPMTMQ  360
QQLQMSMMGM MGMGMGMGMG MGMGMGMGMG VMDMNTIGRP NINGISAVLP NPFMTMTSWD  420
GSGDRLQAAS AALMPDPLST FLACQSQPMT MDVYSRIAAL YQQMQQPPAS SSKS

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	298	303	ERKRRD
2	299	304	RKRRDK

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G00050.1	3e-98	bHLH family protein