PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_022756377.1

Organism

Durio zibethinus

Taxonomic ID

66656

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Malvales; Malvaceae; Helicteroideae; Durio

Family

Trihelix

Protein Properties

Length: 610aa MW: 69217.9 Da PI: 6.6231

Description

Trihelix family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_022756377.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	trihelix	101.3	7.6e-32	420	504	1	86
trihelix 1 rWtkqevlaLiearremeerlrrgklkkplWeevskkmrergferspkqCkekwenlnkrykkikegekkrtsessstcpyfdqle 86 rW++ ev aLi++r +e+++r++ lk+plWeevs++m++ g++rs+k+Ckekwen+nk+++k ke+ kkr s++s+tcpyf+ql+ XP_022756377.1 420 RWPRAEVEALIQVRCHLESNFRESGLKGPLWEEVSSFMASFGYQRSAKRCKEKWENINKYFRKSKENGKKR-SQQSKTCPYFEQLD 504 8******************************************************************98.78889******8 PP

Sequence ? help Back to Top
Protein Sequence Length: 610 aa Download sequence
MRSVKYGAHH PQLQQLMDDD GSSSSSVFSI SDPHHQQQQQ QSIFHPNYSL HSQQQNLSQQ 60 HSVPVTHQLF QHHHHQFQPF QQQPEPAHHH VHPLPFLAIN FKLGLDENSG KKEAALALNH 120 QQNDAAFLHG NELHVPENRR PQQHSILMPH CWHPQEDSPI KEPFWKPLDR CEDRQCNGDE 180 AREIERNKCN KVLLQTATFT GERSKNLDNK YRLFGELEAI YGLAKGRETT HAGSGSALTG 240 ENSPANVGIS MPLSEFQGHN VGAIDGVGNL ATGVDHGSET SIGEEASLRK IQKKRRKKKM 300 KEQLSSMVVF FESLVKQVTE HQEGLHKRFL EVIERMDKER SVKEESWRRQ EAEKRNREAI 360 ARAHEQALAS SKEALIVSYL EKITGQSINL PARTPLLLQP DNAIEPFNES MPVKVDNNSR 420 WPRAEVEALI QVRCHLESNF RESGLKGPLW EEVSSFMASF GYQRSAKRCK EKWENINKYF 480 RKSKENGKKR SQQSKTCPYF EQLDQLYSRI PITSPTSPAP LINSDIEMQQ QGDSDFLDAY 540 IPERDLGITP VNASGNLKVS EMNSPKMDFD GAVAKNVVQG SNGKDNESHG NYVENEGDQE 600 DDDNDSYGGE

Sequence ? help Back to Top

Protein Sequence Length: 610 aa Download sequence

MRSVKYGAHH PQLQQLMDDD GSSSSSVFSI SDPHHQQQQQ QSIFHPNYSL HSQQQNLSQQ  60
HSVPVTHQLF QHHHHQFQPF QQQPEPAHHH VHPLPFLAIN FKLGLDENSG KKEAALALNH  120
QQNDAAFLHG NELHVPENRR PQQHSILMPH CWHPQEDSPI KEPFWKPLDR CEDRQCNGDE  180
AREIERNKCN KVLLQTATFT GERSKNLDNK YRLFGELEAI YGLAKGRETT HAGSGSALTG  240
ENSPANVGIS MPLSEFQGHN VGAIDGVGNL ATGVDHGSET SIGEEASLRK IQKKRRKKKM  300
KEQLSSMVVF FESLVKQVTE HQEGLHKRFL EVIERMDKER SVKEESWRRQ EAEKRNREAI  360
ARAHEQALAS SKEALIVSYL EKITGQSINL PARTPLLLQP DNAIEPFNES MPVKVDNNSR  420
WPRAEVEALI QVRCHLESNF RESGLKGPLW EEVSSFMASF GYQRSAKRCK EKWENINKYF  480
RKSKENGKKR SQQSKTCPYF EQLDQLYSRI PITSPTSPAP LINSDIEMQQ QGDSDFLDAY  540
IPERDLGITP VNASGNLKVS EMNSPKMDFD GAVAKNVVQG SNGKDNESHG NYVENEGDQE  600
DDDNDSYGGE

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	292	299	QKKRRKKK
2	293	297	KKRRK
3	293	298	KKRRKK
4	293	299	KKRRKKK
5	294	302	KRRKKKMKE

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G76890.2	4e-54	Trihelix family protein