PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_022756333.1

Organism

Durio zibethinus

Taxonomic ID

66656

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Malvales; Malvaceae; Helicteroideae; Durio

Family

bHLH

Protein Properties

Length: 468aa MW: 49331.9 Da PI: 6.959

Description

bHLH family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_022756333.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	HLH	36.9	6.6e-12	260	305	5	55
HHHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHHH CS HLH 5 hnerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksLq 55 h+++Er RR+ri +++ L+el+P+a K +Ka++L + ++Y+k Lq XP_022756333.1 260 HSIAERLRRERIAERMKALQELVPNA-----NKTDKASMLDEIIDYVKFLQ 305 99*********************8.....6****************9 PP

Sequence ? help Back to Top
Protein Sequence Length: 468 aa Download sequence
MQPCSREMQA INSLLNPTQQ IPLHDLQSNG NSNSHQQIQN PHFDPTSSHD DFLEQMLSTL 60 PSCSLSDLKS PWNPTKSDET CPPNPDNNVG FHYDEILATK LRQHQINGGG GSSPATAAMK 120 MMMQQQMMLE GRATAFGRGV GGGLTMPLSL GSGAAGSHHN DIVDGSSFKS PNNQDHGGEG 180 SVQALYNGFG GGSLHGTNQS SNRPQHLNHP QGGTMQAQNF GAIAGTVIKQ SQASGSITGG 240 TAAQPKQRVR ARRGQATDPH SIAERLRRER IAERMKALQE LVPNANKTDK ASMLDEIIDY 300 VKFLQLQVKV LSMSRLGGAA AVAPLVAHIP SEGGGDFIQM STDGGSLPRN SNGNHTSSSN 360 DSLTVTEQQV AKLMEEDMGS AMQYLQGKGL CLMPISLATA ISTVTCQSRN PMINNANQNN 420 GSSNHPLLQS SGEGSSSPSM SVLTVQSATM GNGGVDGSVK DAASVSKP

Sequence ? help Back to Top

Protein Sequence Length: 468 aa Download sequence

MQPCSREMQA INSLLNPTQQ IPLHDLQSNG NSNSHQQIQN PHFDPTSSHD DFLEQMLSTL  60
PSCSLSDLKS PWNPTKSDET CPPNPDNNVG FHYDEILATK LRQHQINGGG GSSPATAAMK  120
MMMQQQMMLE GRATAFGRGV GGGLTMPLSL GSGAAGSHHN DIVDGSSFKS PNNQDHGGEG  180
SVQALYNGFG GGSLHGTNQS SNRPQHLNHP QGGTMQAQNF GAIAGTVIKQ SQASGSITGG  240
TAAQPKQRVR ARRGQATDPH SIAERLRRER IAERMKALQE LVPNANKTDK ASMLDEIIDY  300
VKFLQLQVKV LSMSRLGGAA AVAPLVAHIP SEGGGDFIQM STDGGSLPRN SNGNHTSSSN  360
DSLTVTEQQV AKLMEEDMGS AMQYLQGKGL CLMPISLATA ISTVTCQSRN PMINNANQNN  420
GSSNHPLLQS SGEGSSSPSM SVLTVQSATM GNGGVDGSVK DAASVSKP

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	265	270	RLRRER

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT2G24260.1	1e-66	bHLH family protein