PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_022755788.1
Organism
Durio zibethinus
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Malvales; Malvaceae; Helicteroideae; Durio
Family GRAS
Protein Properties Length: 704aa    MW: 79539.7 Da    PI: 5.3999
Description GRAS family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_022755788.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1GRAS381.21.3e-1163296983374
            GRAS   3 elLlecAeavssgdlelaqalLarlselaspdgdpmqRlaayfteALaarlarsvselykalppsetseknsseelaalklfsevsPilkfshlt 97 
                     +lL++cA+av+ +d++  ++lL+++s+++s++gd +qRla+yf++AL +rla+++   y+ l +s+ts    ++ l+a+ ++  ++P+ k+s++ 
  XP_022755788.1 329 SLLTQCAQAVAINDQRTGNELLKQISQHSSSSGDGTQRLAHYFANALMTRLAGMGAPSYSPLLSSRTS---AADILKAYGVYALACPFKKMSNFY 420
                     79*********************************************************999888887...8*********************** PP

            GRAS  98 aNqaIleavegeervHiiDfdisqGlQWpaLlqaLasRpegppslRiTgvgspesg..skeeleetgerLakfAeelgvpfefnvlvakrledle 190
                     aN+ I+e +++e+ +Hi+Df+i +G+QWp+L+q L++R++gpp+lRiTg++ p++g   +e++eetg+rL++++e+++vpfe+ v +ak++e++e
  XP_022755788.1 421 ANKKIMEVAKKETSIHIVDFGICYGFQWPCLIQRLSARAGGPPKLRITGIEFPQPGfrPAERVEETGRRLKRYCERFNVPFEYYV-IAKKWETIE 514
                     *******************************************************9****************************9.7******** PP

            GRAS 191 leeLrvkpgEalaVnlvlqlhrlldesvsleserdevLklvkslsPkvvvvveqeadhnsesFlerflealeyysalfdsleaklpreseerikv 285
                     lee++++++E+++Vn++++l++l+d++v  +s+rd+vLkl++s++P+++++      +n++ F++rf eal ++sa fd +ea++pre+ +r++ 
  XP_022755788.1 515 LEEIKINEDEVVVVNCMYRLKNLPDDTVVGTSARDTVLKLIRSINPELLIHGIASGTYNAPFFVTRFREALFHFSAQFDIFEANVPREDPQRKMF 609
                     *********************************************************************************************** PP

            GRAS 286 ErellgreivnvvacegaerrerhetlekWrerleeaGFkpvplsekaakqaklllrkvksdgyrveeesgslvlgWkdrpLvsvSaWr 374
                     E+e+lgr+i+nvvaceg+er+er et+++W++r  +aGFk+vpl+++ ++++   ++  + + + ++ +  ++++gWk+r ++++S+W+
  XP_022755788.1 610 EKEILGRDIMNVVACEGTERVERPETYKQWQARTLRAGFKQVPLDQELMNKVTNFVQSSYHRDFLIDVDGRWVLQGWKGRVIYALSCWK 698
                     ************************************************************999*************************8 PP
Sequence ? help Back to Top
Protein Sequence    Length: 704 aa     Download sequence    
MDTLFQDFPA SMYGFKSDND SVPMYSNHNL VNGFKESIEQ NFPSPPSLPS SPESPVDSDS  60
SSGTSSVGHP LDNVPFANEM LKYINEMLME EDLEEKTCML QDCLALQAAE KSFYEVLGHE  120
YPLSADPISP CTGQNCYKPD DNLSQSRSIC SSINYTTATN SVEWSGIYSP GEFESSYIQT  180
SLIDSLERTS LVPNLQRETT IEPFRHFRSE IGEASKPSLI GDKVNLAPES NLSTPSVPNG  240
RYQSPLGSRG RKNYQREDDD HLEEGRSSKQ SALSLEDSEQ SEMFDDLLLC KGENEDSPKC  300
SLYGNYQQNG QLKGLKKKGK KSEVVDLWSL LTQCAQAVAI NDQRTGNELL KQISQHSSSS  360
GDGTQRLAHY FANALMTRLA GMGAPSYSPL LSSRTSAADI LKAYGVYALA CPFKKMSNFY  420
ANKKIMEVAK KETSIHIVDF GICYGFQWPC LIQRLSARAG GPPKLRITGI EFPQPGFRPA  480
ERVEETGRRL KRYCERFNVP FEYYVIAKKW ETIELEEIKI NEDEVVVVNC MYRLKNLPDD  540
TVVGTSARDT VLKLIRSINP ELLIHGIASG TYNAPFFVTR FREALFHFSA QFDIFEANVP  600
REDPQRKMFE KEILGRDIMN VVACEGTERV ERPETYKQWQ ARTLRAGFKQ VPLDQELMNK  660
VTNFVQSSYH RDFLIDVDGR WVLQGWKGRV IYALSCWKPL RNQL
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G29060.10.0GRAS family protein