PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Home  TFext  BLAST  Prediction  Download  Help  About  Links  PlantRegMap
(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_022755114.1
Organism
Durio zibethinus
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Malvales; Malvaceae; Helicteroideae; Durio
Family C3H
Protein Properties Length: 395aa    MW: 45276.3 Da    PI: 5.0522
Description C3H family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_022755114.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1zf-CCCH19.32e-0687108527
                     --SGGGGTS--TTTTT-SS-SSS CS
         zf-CCCH   5 lCrffartGtCkyGdrCkFaHgp 27 
                     +C f++  G+C+ GdrC+F Hgp
  XP_022755114.1  87 PCYFYFN-GFCNKGDRCSFLHGP 108
                     7999999.*************96 PP
Sequence ? help Back to Top
Protein Sequence    Length: 395 aa     Download sequence    
MEEEWLKRNT DCVYFLASPL TCKKGIDCEY RHSENARLNP RDCWYWLAGN CINPACGFRH  60
PPLDGVSSES AALPYQCSAP SNKTNLPCYF YFNGFCNKGD RCSFLHGPDD SAVTGKSLKT  120
DVLPLDYKTS REIDAGAAPT ETHPNPSKTA SISSKDMDAQ LKVDHQQSVP KTMIQKSVFP  180
KTSVSELGQA DFVKSQSLLL KKGITQSRSP TCTDESSEEQ MDDQVEPEEW LESSPGFDVL  240
VDNKSEDLDY ENDSEYLLGP DGEQREHFLS YDYEDSVQHE TSYPNLEFSN DLDVYDAYEG  300
SDNEYIFDNV RNPSAHPRDR RLDSIFFEKR KRLLPVELSI GKQIGMDLRD YLRKRRVVKG  360
NPLNCLSRRS EYSHLIGQSW ERPPRHSMDW KLRRR