PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_022754760.1

Organism

Durio zibethinus

Taxonomic ID

66656

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Malvales; Malvaceae; Helicteroideae; Durio

Family

bHLH

Protein Properties

Length: 543aa MW: 58470.3 Da PI: 5.1054

Description

bHLH family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_022754760.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	HLH	36.2	1.1e-11	305	350	5	55
HHHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHHH CS HLH 5 hnerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksLq 55 h+++Er RR++i +++ +L+el+P++ K +Ka++L + +eY+k Lq XP_022754760.1 305 HSIAERLRREKIAERMKNLQELVPNS-----NKTDKASMLDEIIEYVKFLQ 350 99*********************7.....5****************9 PP

Sequence ? help Back to Top
Protein Sequence Length: 543 aa Download sequence
MDDYLDQYFS CLSWSDVNVK ERSSWVHSEP EKPNALLSSS LGVYQDDKNN SPVSMINSNY 60 SMGCLAAHGT PLVPHGESGC GVEHSLLSGE SGPQMDGENC LRNSSKEMLN VSFGFGNLEL 120 QFITAVDSSG SLSLGSSKDL PVVADMTPSY SSNERGHAIC NGGESSEFQR SLTGLETLSS 180 IPQLWHPQPY DTVSSIPTLI EQTRMQSSCL QRENGNVDDD GNINRFVEID KILQPENLFA 240 SVNEKGKQDM QNSLYPSFPA DHQITKTMIG LPSLEQSASP TPNNDCNGIG KPRVRARRGQ 300 ATDPHSIAER LRREKIAERM KNLQELVPNS NKTDKASMLD EIIEYVKFLQ LQVKVLSMSR 360 LGAAGAVVPL ITDGQAEGSN GLSLTPLVGQ GVDFSPSPDQ VVFEQEVVKL MESNVTMAMQ 420 YLQSKGLCLM PIALAAAISN GKASSSPGHA SEERKKLAFT KSLVNNDIVH NTYSSNGLVQ 480 NSNCSSSSSS SSSSSSSGSL PGVGINHMTS DSNFMIGKFS AGLMANGRNG TFKQEVNTLC 540 TAK

Sequence ? help Back to Top

Protein Sequence Length: 543 aa Download sequence

MDDYLDQYFS CLSWSDVNVK ERSSWVHSEP EKPNALLSSS LGVYQDDKNN SPVSMINSNY  60
SMGCLAAHGT PLVPHGESGC GVEHSLLSGE SGPQMDGENC LRNSSKEMLN VSFGFGNLEL  120
QFITAVDSSG SLSLGSSKDL PVVADMTPSY SSNERGHAIC NGGESSEFQR SLTGLETLSS  180
IPQLWHPQPY DTVSSIPTLI EQTRMQSSCL QRENGNVDDD GNINRFVEID KILQPENLFA  240
SVNEKGKQDM QNSLYPSFPA DHQITKTMIG LPSLEQSASP TPNNDCNGIG KPRVRARRGQ  300
ATDPHSIAER LRREKIAERM KNLQELVPNS NKTDKASMLD EIIEYVKFLQ LQVKVLSMSR  360
LGAAGAVVPL ITDGQAEGSN GLSLTPLVGQ GVDFSPSPDQ VVFEQEVVKL MESNVTMAMQ  420
YLQSKGLCLM PIALAAAISN GKASSSPGHA SEERKKLAFT KSLVNNDIVH NTYSSNGLVQ  480
NSNCSSSSSS SSSSSSSGSL PGVGINHMTS DSNFMIGKFS AGLMANGRNG TFKQEVNTLC  540
TAK

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G58010.1	2e-59	bHLH family protein