PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_022754283.1

Organism

Durio zibethinus

Taxonomic ID

66656

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Malvales; Malvaceae; Helicteroideae; Durio

Family

bHLH

Protein Properties

Length: 434aa MW: 48333.9 Da PI: 8.3686

Description

bHLH family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_022754283.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	HLH	31.5	3.1e-10	373	413	11	55
HHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHHH CS HLH 11 rRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksLq 55 RR +i +++ +L++l+P+ +k + a++L +Av+YIk+Lq XP_022754283.1 373 VRRTKISERMRKLQDLVPNM----DKQTNTADMLDLAVDYIKDLQ 413 6****************7....688***************9 PP

Sequence ? help Back to Top
Protein Sequence Length: 434 aa Download sequence
MESDLQQQHH HLLDYNQPQH HQRQMNSGLM RFQSAPSSYF SNILDKDFCQ EFLNRPPSPE 60 TERIIVRFLS SSGDAGGVVG GNTVNISDQN PCAIMQNSPV RETAVKIEQQ TQIMTPINNQ 120 TGVMQQQQQQ QGNYSSASQN FYQMQPQQHL PNQQSGSTMD YRIPNSTGMA RPTRVKMGGC 180 NNSNLIRHSS SPAGLFANID IENSYGVMRG MGDYGSANSS NRETAFPPAS RPPPGLMSPI 240 AEMGNKSMSP NSSENTGFGD NRRNNYSSGF PVTSWDDPVM ISDNMSGVKR LGEDDRSLSG 300 LDFDGAETLN TDTGNHPPPL LAHHLSLPKS SPDMSAIEKF FKFQDSVPRK IRAKRGCATH 360 PRSIAERFVS IQVRRTKISE RMRKLQDLVP NMDKQTNTAD MLDLAVDYIK DLQKQVKSLS 420 DNRAKCSCAN RQQQ

Sequence ? help Back to Top

Protein Sequence Length: 434 aa Download sequence

MESDLQQQHH HLLDYNQPQH HQRQMNSGLM RFQSAPSSYF SNILDKDFCQ EFLNRPPSPE  60
TERIIVRFLS SSGDAGGVVG GNTVNISDQN PCAIMQNSPV RETAVKIEQQ TQIMTPINNQ  120
TGVMQQQQQQ QGNYSSASQN FYQMQPQQHL PNQQSGSTMD YRIPNSTGMA RPTRVKMGGC  180
NNSNLIRHSS SPAGLFANID IENSYGVMRG MGDYGSANSS NRETAFPPAS RPPPGLMSPI  240
AEMGNKSMSP NSSENTGFGD NRRNNYSSGF PVTSWDDPVM ISDNMSGVKR LGEDDRSLSG  300
LDFDGAETLN TDTGNHPPPL LAHHLSLPKS SPDMSAIEKF FKFQDSVPRK IRAKRGCATH  360
PRSIAERFVS IQVRRTKISE RMRKLQDLVP NMDKQTNTAD MLDLAVDYIK DLQKQVKSLS  420
DNRAKCSCAN RQQQ

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT2G42280.1	3e-63	bHLH family protein