PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_022752863.1

Organism

Durio zibethinus

Taxonomic ID

66656

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Malvales; Malvaceae; Helicteroideae; Durio

Family

ARF

Protein Properties

Length: 708aa MW: 77778.1 Da PI: 8.2908

Description

ARF family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_022752863.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	B3	75.4	6.4e-24	113	214	1	99
EEEE-..-HHHHTT-EE--HHH.HTT.......---..--SEEEEEETTS-EEEEEE..EEETTEEEE-TTHHHHHHHHT--TT-EEEEEE-SSS CS B3 1 ffkvltpsdvlksgrlvlpkkfaeeh.......ggkkeesktltledesgrsWevkliyrkksgryvltkGWkeFvkangLkegDfvvFkldgrs 88 f k+lt+sd+++ g +++p+ +ae++ ++ + t++ +d +g++W++++iyr++++r++lt+GW++Fv++++L +gD++vF + + XP_022752863.1 113 FAKTLTQSDANNGGGFSVPRYCAETIfprldysADPPVQ--TVIAKDVHGEVWKFRHIYRGTPRRHLLTTGWSSFVNQKKLVAGDSIVFL--RAE 203 89**************************996555555..8********************************************..448 PP EE..EEEEE-S CS B3 89 efelvvkvfrk 99 ++ l+v+++r+ XP_022752863.1 204 NGDLCVGIRRA 214 8999**997 PP
2	Auxin_resp	113	2.8e-37	283	365	2	83
Auxin_resp 2 ahaastksvFevvYnPrastseFvvkvekvekalkvkvsvGmRfkmafetedsserrl.sGtvvgvsdldpvrWpnSkWrsLk 83 + a+ +++Fev+Y+Prast+eF+vk + v++a++++++ GmRfkmafetedss++++ +Gtv++v+ +dp+ WpnS+Wr+L+ XP_022752863.1 283 VALAAGGQPFEVFYYPRASTPEFCVKSSAVKAAMRIPWCSGMRFKMAFETEDSSRISWfMGTVSSVQVADPFPWPNSPWRLLQ 365 6678899**************************************************************************97 PP

Sequence ? help Back to Top
Protein Sequence Length: 708 aa Download sequence
MKEPEKSLDP ELWHACAGSM VQIPPVNSKV FYFPQGHAEH SLSSVDFSSS PQIPALILCR 60 VASVKFLADI ETDEVYAKVR LIPLPNSERD LEDDAVLVGG FNGSDNVEKP ASFAKTLTQS 120 DANNGGGFSV PRYCAETIFP RLDYSADPPV QTVIAKDVHG EVWKFRHIYR GTPRRHLLTT 180 GWSSFVNQKK LVAGDSIVFL RAENGDLCVG IRRAKRGIGN GPESGAPAWN SGLGNGNSVG 240 PYGGFSAFLR EDESKIMRNG SLGFGGNLRG KAKVRPEDIL KAVALAAGGQ PFEVFYYPRA 300 STPEFCVKSS AVKAAMRIPW CSGMRFKMAF ETEDSSRISW FMGTVSSVQV ADPFPWPNSP 360 WRLLQVTWDE PDLLQNVKRV SPWLVELVSN MPAIHLSPFS PPRKKLRLPQ HLDFPLDGQF 420 PMPSFSGNPL GPSSPLRCLS DNAPAGIQGA RHAQFGLSLS DFHLNNKLQS GLFLSSFQRC 480 DPHSRISDGI MMARRTNSND NVSCLLTMGN CSQKEKSDKA KRYQFLLFGQ PILTEQQLSR 540 SCSSEAVSQV INGKSSLDGN GDKTKDSADG SGSSLENLFS TKKSSTAGFL WKQDYRTTEL 600 GLDTGHCKVF LESEDVGRTL DLSVLGSYEE LYRRLANMFG IERSEILGHV LYRDATGAVK 660 HTGDEPFSAF MKTTKRLTIR MDSGNDTVGR SWLTGMRTAE NGPLSIFA

Sequence ? help Back to Top

Protein Sequence Length: 708 aa Download sequence

MKEPEKSLDP ELWHACAGSM VQIPPVNSKV FYFPQGHAEH SLSSVDFSSS PQIPALILCR  60
VASVKFLADI ETDEVYAKVR LIPLPNSERD LEDDAVLVGG FNGSDNVEKP ASFAKTLTQS  120
DANNGGGFSV PRYCAETIFP RLDYSADPPV QTVIAKDVHG EVWKFRHIYR GTPRRHLLTT  180
GWSSFVNQKK LVAGDSIVFL RAENGDLCVG IRRAKRGIGN GPESGAPAWN SGLGNGNSVG  240
PYGGFSAFLR EDESKIMRNG SLGFGGNLRG KAKVRPEDIL KAVALAAGGQ PFEVFYYPRA  300
STPEFCVKSS AVKAAMRIPW CSGMRFKMAF ETEDSSRISW FMGTVSSVQV ADPFPWPNSP  360
WRLLQVTWDE PDLLQNVKRV SPWLVELVSN MPAIHLSPFS PPRKKLRLPQ HLDFPLDGQF  420
PMPSFSGNPL GPSSPLRCLS DNAPAGIQGA RHAQFGLSLS DFHLNNKLQS GLFLSSFQRC  480
DPHSRISDGI MMARRTNSND NVSCLLTMGN CSQKEKSDKA KRYQFLLFGQ PILTEQQLSR  540
SCSSEAVSQV INGKSSLDGN GDKTKDSADG SGSSLENLFS TKKSSTAGFL WKQDYRTTEL  600
GLDTGHCKVF LESEDVGRTL DLSVLGSYEE LYRRLANMFG IERSEILGHV LYRDATGAVK  660
HTGDEPFSAF MKTTKRLTIR MDSGNDTVGR SWLTGMRTAE NGPLSIFA

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT2G28350.1	0.0	ARF family protein