PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_022752856.1
Organism
Durio zibethinus
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Malvales; Malvaceae; Helicteroideae; Durio
Family HD-ZIP
Protein Properties Length: 845aa    MW: 92130.9 Da    PI: 6.0038
Description HD-ZIP family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_022752856.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Homeobox57.22.9e-182885457
                    -SS--HHHHHHHHHHHHHSSS--HHHHHHHHHHC....TS-HHHHHHHHHHHHHHHHC CS
        Homeobox  4 RttftkeqleeLeelFeknrypsaeereeLAkkl....gLterqVkvWFqNrRakekk 57
                      ++t+eq+e+Le++++++++ps  +r++L +++    +++ +q+kvWFqNrR +ek+
  XP_022752856.1 28 YVRYTAEQVEALERVYAECPKPSSLRRQQLIRECpilsNIEPKQIKVWFQNRRCREKQ 85
                    5789****************************************************97 PP
2START153.71.6e-481673742204
                     HHHHHHHHHHHHHHHC-TT-EEEEEXCCTTEEEEEEESSS.SCEEEEEEEECCSCHHHHHHHHHCCCGGCT-TT-SEEEEEEEECTT..EEEEEE CS
           START   2 laeeaaqelvkkalaeepgWvkssesengdevlqkfeeskvdsgealrasgvvdmvlallveellddkeqWdetlakaetlevissg..galqlm 94 
                     +aee+++e+++ka+ ++  Wv+++ +++g++++ +f+ s+++sg a+ra+g+v  +++   +e+l+d++ W  +++  e+      g  g+++l 
  XP_022752856.1 167 IAEETLAEFLSKATGTAVDWVQMPGMKPGPDSVGIFAISQSCSGVAARACGLVSLEPT-KIAEILKDRPSWFCDCRNLEVFTMFPAGngGTIELV 260
                     7899******************************************************.7777777777*******9999999998888****** PP

                     EEXXTTXX-SSX.EEEEEEEEEEE.TTS-EEEEEEEEE-TTS--....-TTSEE-EESSEEEEEEEECTCEEEEEEEE-EE--SSXXHHHHHHHH CS
           START  95 vaelqalsplvp.RdfvfvRyirqlgagdwvivdvSvdseqkppe...sssvvRaellpSgiliepksnghskvtwvehvdlkgrlphwllrslv 185
                     ++++ a+++l+p Rdf+++Ry+ +l+ g++v++++S++     p+    +++vRae+lpSg+li+p+++g+s +++v+h +l++++++++lr+l+
  XP_022752856.1 261 YTQTFAPTTLAPaRDFWTLRYTTTLENGSLVVCERSLSGSGAGPStaaAAQFVRAEVLPSGYLIRPCEGGGSIIHIVDHLNLEAWSVPEVLRPLY 355
                     **************************************88888877999********************************************** PP

                     HHHHHHHHHHHHHHTXXXX CS
           START 186 ksglaegaktwvatlqrqc 204
                     +s+ + ++k++ a+l++ +
  XP_022752856.1 356 ESSKVIAQKMTIAALRYIR 374
                     **************99865 PP
Sequence ? help Back to Top
Protein Sequence    Length: 845 aa     Download sequence    
MAMAVAQHRE SSSGSGSSIS KHLDAGKYVR YTAEQVEALE RVYAECPKPS SLRRQQLIRE  60
CPILSNIEPK QIKVWFQNRR CREKQRKEAS GLQTVNRKLT AMNKLLMEEN DRLQKQVSQL  120
VCENGHMRQQ LHTVNASATD ASCDSVVTTP QQHSLRDANN PAGLLSIAEE TLAEFLSKAT  180
GTAVDWVQMP GMKPGPDSVG IFAISQSCSG VAARACGLVS LEPTKIAEIL KDRPSWFCDC  240
RNLEVFTMFP AGNGGTIELV YTQTFAPTTL APARDFWTLR YTTTLENGSL VVCERSLSGS  300
GAGPSTAAAA QFVRAEVLPS GYLIRPCEGG GSIIHIVDHL NLEAWSVPEV LRPLYESSKV  360
IAQKMTIAAL RYIRQIAQET SGEVVYGLGR QPAVLRTFSQ RLSRGFNDAI NGFNDDGWSI  420
MNCDGTEDVI IAINLSKSLS STSNPASAFS FLGGVLCAKA SMLLQNVPPA VLVRFLREHR  480
SEWADFNVDA YSAASLKAGT YAYPGMRPTR FTGSQTIMPL GHTIEHEELL EVIRLEGHSL  540
AQEDAFLSRD IHLLQICSGI DENAVGACSE LVFAPIDEMF PDDAPLLPSG FRVIPLDSKP  600
SDAQDSLTTN RTLDLTSSLE VGPATNHAAG DATSCQNTRS VLTIAFQFPF DINLQDHVAT  660
MARQYVRSVI SSVQRVAMAI SPSGLSPAVG PKLSPGSPEA LTLAHWICQS YSYHLGAELL  720
RSESLGDSVL KNLWQHQDAV LCCSLKSLPV FIFANQAGLD MLETTLVALQ DITLEKIFDE  780
SGRKALCSDF AKLMQEGFAY LPAGICMSTM GRHVSYEQAV AWKVHAADDS TVHCLAFSFV  840
NWSFV
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G60690.10.0HD-ZIP family protein