PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_022749260.1
Organism
Durio zibethinus
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Malvales; Malvaceae; Helicteroideae; Durio
Family GRAS
Protein Properties Length: 572aa    MW: 64226.8 Da    PI: 4.7831
Description GRAS family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_022749260.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1GRAS455.53.4e-1392045723374
            GRAS   3 elLlecAeavssgdlelaqalLarlselaspdgdpmqRlaayfteALaarlarsvselykalppsetseknsseelaalklfsevsPilkfshlt 97 
                     + L+ecA  +s+g+ e+a+a++++l++++s +gdp qR+aay++e+Laar+a+s++ lykal+++e +   ss++laa+++++ev+P++kf++++
  XP_022749260.1 204 QMLIECAAILSEGNIEEASAIINQLRQMVSIQGDPPQRIAAYMVEGLAARMASSGKYLYKALRCKEPP---SSDRLAAMQILFEVCPCFKFGFMA 295
                     79*****************************************************************9...9*********************** PP

            GRAS  98 aNqaIleavegeervHiiDfdisqGlQWpaLlqaLasRpegppslRiTgvgspesg..skeeleetgerLakfAeelgvpfefnvlvakrledle 190
                     aN aI ea++ e+r+HiiDfdi+qG Q+++L+q++a+Rp++ p+lR+Tgv++pes+   +  le +g rL+k+Ae+lgvpfef++ va+r++ ++
  XP_022749260.1 296 ANGAIIEAFKDEKRIHIIDFDINQGSQYITLIQTIAKRPDKLPHLRLTGVDDPESVqrLNGGLEIVGLRLEKLAEALGVPFEFQA-VASRTSLVT 389
                     ******************************************************99777889***********************.7******** PP

            GRAS 191 leeLrvkpgEalaVnlvlqlhrlldesvsleserdevLklvkslsPkvvvvveqeadhnsesFlerflealeyysalfdsleaklpreseerikv 285
                     +++L+++pgEal+Vn++lqlh+++desvs+ ++rd++L++vksl+Pk+v+vveq++++n+++Fl rf+ea +yysa+f+sl+a+lpres++r++v
  XP_022749260.1 390 PSMLDCQPGEALIVNFALQLHHMPDESVSTINQRDQLLRMVKSLNPKLVTVVEQDVNTNTSPFLPRFVEAYSYYSAVFESLDATLPRESQDRMNV 484
                     *********************************************************************************************** PP

            GRAS 286 ErellgreivnvvacegaerrerhetlekWrerleeaGFkpvplsekaakqaklllrkvksdgyrveeesgslvlgWkdrpLvsvSaWr 374
                     Er++l+r+ivn+vaceg+er+er+e ++kWr+r+++aGF++ p+s ++ + ++ l+r++ ++ y+++ee g+l +gW+d++L+++SaWr
  XP_022749260.1 485 ERQCLARDIVNIVACEGEERIERCEVAGKWRARMMMAGFTSSPMSPNVIDMIRKLIREYCDR-YKLKEELGALHFGWEDKNLIVASAWR 572
                     ************************************************************66.*************************8 PP
Sequence ? help Back to Top
Protein Sequence    Length: 572 aa     Download sequence    
MYQDSFYNTT IQRVETMSLV RSAKRATAAY RNTKLYSIQG SSNSSGLSSQ IFGSDKHKPV  60
YISDSYSSES YEKYFIDSPS EELIHPSSSG ISGGSFHPQD VSSYQLRDYL EIESPDTLDS  120
DTDMMKLKLQ ELERALLADN DVDEDDDMFG NGLSMEIDVE LSDPIRTELL HDSPKESSSS  180
DSNLSSICSN KEVSHVRPSR TPKQMLIECA AILSEGNIEE ASAIINQLRQ MVSIQGDPPQ  240
RIAAYMVEGL AARMASSGKY LYKALRCKEP PSSDRLAAMQ ILFEVCPCFK FGFMAANGAI  300
IEAFKDEKRI HIIDFDINQG SQYITLIQTI AKRPDKLPHL RLTGVDDPES VQRLNGGLEI  360
VGLRLEKLAE ALGVPFEFQA VASRTSLVTP SMLDCQPGEA LIVNFALQLH HMPDESVSTI  420
NQRDQLLRMV KSLNPKLVTV VEQDVNTNTS PFLPRFVEAY SYYSAVFESL DATLPRESQD  480
RMNVERQCLA RDIVNIVACE GEERIERCEV AGKWRARMMM AGFTSSPMSP NVIDMIRKLI  540
REYCDRYKLK EELGALHFGW EDKNLIVASA WR
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G21450.10.0GRAS family protein