PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_022748147.1
Organism
Durio zibethinus
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Malvales; Malvaceae; Helicteroideae; Durio
Family M-type_MADS
Protein Properties Length: 359aa    MW: 39234.4 Da    PI: 5.9421
Description M-type_MADS family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_022748147.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1SRF-TF47.62.1e-151152344
                    --SHHHHHHHHHHHHHHHHHHHHHHHHHHT-EEEEEEE-TTS CS
          SRF-TF  3 ienksnrqvtfskRrngilKKAeELSvLCdaevaviifsstg 44
                    i n+s r  ++ kRr g+ KK  ELS+LC++++++ii+s++ 
  XP_022748147.1 11 IANDSARRASLKKRRLGLVKKVRELSTLCGTKACLIIYSPDE 52
                    89*************************************985 PP
Sequence ? help Back to Top
Protein Sequence    Length: 359 aa     Download sequence    
MTRKKVKLAW IANDSARRAS LKKRRLGLVK KVRELSTLCG TKACLIIYSP DESEPLVWPS  60
HSEVQEQIGE FHNMPELERM KKMMNQETYL RERVTKVEEQ LRKIQRRNKE VEMGSLMYQI  120
DQGKGLDELN LVELHGLTWL VEEKMKEINK RIEFFQQVPF AQPAGHPHGD LPLQGPEDDL  180
TARLGGGSAG FQGDNGRITA ESLLWDQWFI DMINNNEFKS AAGSSSIRGD MGLPYQPFAG  240
LAAEDLGLPR QPFVGSSSAD IGLPQYGNFG GPTTDMGLPP LAFRPHGGAS DMGLNHGNVG  300
GSTFGTFGSE IGQGLYPFST GSELGLPFGP FGGASSTGAG SDIGLPLDGK TWPPNNFSP
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
1325RKKVKLAWIANDSARRASLKKRR
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G48670.13e-41M-type_MADS family protein