PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_022747596.1

Organism

Durio zibethinus

Taxonomic ID

66656

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Malvales; Malvaceae; Helicteroideae; Durio

Family

E2F/DP

Protein Properties

Length: 488aa MW: 53860 Da PI: 5.1547

Description

E2F/DP family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_022747596.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	E2F_TDP	82.2	4.5e-26	165	230	1	71
E2F_TDP 1 rkeksLrlltqkflkllekseegivtlnevakeLvsedvknkrRRiYDilNVLealnliekkekneirwkg 71 r+++sL+llt++f++l++++ +gi++ln++a++L +v ++RRiYDi+NVLe+++liekk kn+i+wkg XP_022747596.1 165 RYDSSLGLLTKRFINLIKHAGDGILDLNKAAETL---EV--QKRRIYDITNVLEGIGLIEKKLKNRIHWKG 230 6899****************************...99..**************************98 PP

Sequence ? help Back to Top
Protein Sequence Length: 488 aa Download sequence
MSSGARASAR PTPPYPPPSP VVPSAPASMG PSIVPPIRRH LAFASTKPPF VDPYDYHRFS 60 SNNSKNNLTG TLNAHGLFAD QEVEAIVVRS PQLKRKNTMD NNEVESSHWT GSPGVTSISN 120 SPFQTPVSAK GGRINNRSKS NKSTPQTSAS NAGSLSPVTP AGSSRYDSSL GLLTKRFINL 180 IKHAGDGILD LNKAAETLEV QKRRIYDITN VLEGIGLIEK KLKNRIHWKG VDASRPGEAD 240 GNVSVLQGEI ENLSMEERRL DDQIREMQER LRGLSENENN QRWLFVTEED IKGLPCFQNE 300 TLIAIKAPHG TTLEVPDPDE AVDYSQRRYR IILRSTMGPI DVFLVSQFEE KFEEMNGVEP 360 PVSVPLSSSS GSNENQVELD NMEGTRKEIE PQAQQTHQMG SDINASKESV GGIMRIFPSD 420 IGNDADYWLL SDADFSITDM WKTDCFEWSG VDMFHPDYGM ADVSTPRPQT PPSSMAEVPS 480 SNFNSTRR

Sequence ? help Back to Top

Protein Sequence Length: 488 aa Download sequence

MSSGARASAR PTPPYPPPSP VVPSAPASMG PSIVPPIRRH LAFASTKPPF VDPYDYHRFS  60
SNNSKNNLTG TLNAHGLFAD QEVEAIVVRS PQLKRKNTMD NNEVESSHWT GSPGVTSISN  120
SPFQTPVSAK GGRINNRSKS NKSTPQTSAS NAGSLSPVTP AGSSRYDSSL GLLTKRFINL  180
IKHAGDGILD LNKAAETLEV QKRRIYDITN VLEGIGLIEK KLKNRIHWKG VDASRPGEAD  240
GNVSVLQGEI ENLSMEERRL DDQIREMQER LRGLSENENN QRWLFVTEED IKGLPCFQNE  300
TLIAIKAPHG TTLEVPDPDE AVDYSQRRYR IILRSTMGPI DVFLVSQFEE KFEEMNGVEP  360
PVSVPLSSSS GSNENQVELD NMEGTRKEIE PQAQQTHQMG SDINASKESV GGIMRIFPSD  420
IGNDADYWLL SDADFSITDM WKTDCFEWSG VDMFHPDYGM ADVSTPRPQT PPSSMAEVPS  480
SNFNSTRR

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT2G36010.1	1e-174	E2F/DP family protein