PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_022746289.1

Organism

Durio zibethinus

Taxonomic ID

66656

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Malvales; Malvaceae; Helicteroideae; Durio

Family

MYB_related

Protein Properties

Length: 766aa MW: 85161 Da PI: 4.6234

Description

MYB_related family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_022746289.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Myb_DNA-binding	26.7	1.3e-08	704	757	1	46
TSSS-HHHHHHHHHHHHHTTTT....-HHHHHHHHT....TTS-HHHHHHHHHH CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGgg....tWktIartmg....kgRtlkqcksrwqk 46 + +WT +E+e l ++v+++G+ Wk+I gRt ++k++w++ XP_022746289.1 704 KVPWTNDEEEMLRKGVQKFGNYggnvPWKRILDFGAkvflSGRTTVDLKDKWRN 757 579***************889****9876688899**********9 PP

Sequence ? help Back to Top
Protein Sequence Length: 766 aa Download sequence
MDELGRMFGI YSSGPSRPWL WIIEYLSSFP QMDTSVIRDL IETAPVSPDG LGKNTSERVA 60 LRCLEEVFGP KNGLENVAPP DSRVAFDLSS SCEDVLEHIL QEVPLSNLKK AGAELLRLDV 120 NPFMMHKRAS LPKCALEQLK SSILEEIPDH EGDENVPTLR PDDSDDENCN QEGNLIPQIH 180 ENDNEILQDG LLERNSIHSK RCRNDLVAGN LVGLVSVNQN SLHNDLHLNA KKFKQDATCT 240 IQSVEQIPIC LHGEEQLEDL SGGIIKVTEI EGNNLGKDSQ AGEGDQDVCV PSRTLGQSDA 300 FGHVELQDNQ MVNVQNADVL AERKYGNRPC QNVVMNESDH VENGALQRGA SGDAGENIDQ 360 GFPLSSPNSS SADGLQQNID LVEAKADMDH PCVEQICEYE DERFNIALKK SLFLSSLCTP 420 SQDLVRKAGW TEQNICAKCN QNGQVLICSS SGCQLVVHES CLDSAARFDE KGNFYCPFCA 480 YSVSISKYLE AKDKASLARK ELAAFMEFCS KKLTEEQRKL QSHSRLNGNE DLVGIQESGH 540 LGESEHNFIN QNREVNHGPS ASHLNGNKLC VEEDTFMGGA VDVQGENNEE EEKLVLGHQS 600 MRECEHQEEE LPANLKFNDD NPTSENTKTV PVIQVEVKED VMKEAVEPQI TDAPAKPGCS 660 LNSDGEESST DANNKYIISS YSMRFRKRET KYSFPATPQL RRKKVPWTND EEEMLRKGVQ 720 KFGNYGGNVP WKRILDFGAK VFLSGRTTVD LKDKWRNMSK GSPRCK

Sequence ? help Back to Top

Protein Sequence Length: 766 aa Download sequence

MDELGRMFGI YSSGPSRPWL WIIEYLSSFP QMDTSVIRDL IETAPVSPDG LGKNTSERVA  60
LRCLEEVFGP KNGLENVAPP DSRVAFDLSS SCEDVLEHIL QEVPLSNLKK AGAELLRLDV  120
NPFMMHKRAS LPKCALEQLK SSILEEIPDH EGDENVPTLR PDDSDDENCN QEGNLIPQIH  180
ENDNEILQDG LLERNSIHSK RCRNDLVAGN LVGLVSVNQN SLHNDLHLNA KKFKQDATCT  240
IQSVEQIPIC LHGEEQLEDL SGGIIKVTEI EGNNLGKDSQ AGEGDQDVCV PSRTLGQSDA  300
FGHVELQDNQ MVNVQNADVL AERKYGNRPC QNVVMNESDH VENGALQRGA SGDAGENIDQ  360
GFPLSSPNSS SADGLQQNID LVEAKADMDH PCVEQICEYE DERFNIALKK SLFLSSLCTP  420
SQDLVRKAGW TEQNICAKCN QNGQVLICSS SGCQLVVHES CLDSAARFDE KGNFYCPFCA  480
YSVSISKYLE AKDKASLARK ELAAFMEFCS KKLTEEQRKL QSHSRLNGNE DLVGIQESGH  540
LGESEHNFIN QNREVNHGPS ASHLNGNKLC VEEDTFMGGA VDVQGENNEE EEKLVLGHQS  600
MRECEHQEEE LPANLKFNDD NPTSENTKTV PVIQVEVKED VMKEAVEPQI TDAPAKPGCS  660
LNSDGEESST DANNKYIISS YSMRFRKRET KYSFPATPQL RRKKVPWTND EEEMLRKGVQ  720
KFGNYGGNVP WKRILDFGAK VFLSGRTTVD LKDKWRNMSK GSPRCK

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	686	704	RKRETKYSFPATPQLRRKK

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G58340.2	3e-08	MYB_related family protein