PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_022745973.1

Organism

Durio zibethinus

Taxonomic ID

66656

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Malvales; Malvaceae; Helicteroideae; Durio

Family

MYB_related

Protein Properties

Length: 482aa MW: 54246.3 Da PI: 9.2258

Description

MYB_related family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_022745973.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Myb_DNA-binding	27.1	9.8e-09	352	399	4	48
S-HHHHHHHHHHHHHTTTT-HHHHHHHHT...TTS-HHHHHHHHHHHT CS Myb_DNA-binding 4 WTteEdellvdavkqlGggtWktIartmg...kgRtlkqcksrwqkyl 48 WT E +lvd+++q+G g+W+ I r + Rt+ +++++w+++l XP_022745973.1 352 WTLAEVIKLVDGIAQYGVGRWTDIKRLLFassAYRTPVDLRDKWRNLL 399 ******************************99**********96 PP

Sequence ? help Back to Top
Protein Sequence Length: 482 aa Download sequence
MKTDRKQHLI KKLCNMKRQR VDQSIVPGLE DEATEVAHLL AEPKSEHVSR DGVLCFGKDN 60 LEKHLKMEDF SCAFDYGWKI NYGGLDSIHG QGGDDLKLEV LDGLLDEVDE VDDIHAAHDI 120 SGACEDFLLD IEFPEKHSVL DCGPREGSTL RNSSSESHSP GFSGSSNSAG GISESSIPTV 180 QESNSKNGVL GNMVSCDLHR NFRSKYGCQG PVLDTIRPTI EDVQDLDVSD DDEEPLVSFI 240 LSNRKVKGSV KVTKGGTLLR QKRLRKPTRR YIEEFSRNST TGKNKCLKVR SQEEFPQVPS 300 KSQPRRGRPK KIVPKLELES DCEFSASESE DQHKRTKRSK TACDRRKHQT MWTLAEVIKL 360 VDGIAQYGVG RWTDIKRLLF ASSAYRTPVD LRDKWRNLLR SSSAHGHNRR ELQVQNNVKH 420 AVRPLPKPVV RRIRELATIH PYPRVRSSKI SSVDYVPSSK QPTTKVAPVY SPARNLRGKN 480 CC

Sequence ? help Back to Top

Protein Sequence Length: 482 aa Download sequence

MKTDRKQHLI KKLCNMKRQR VDQSIVPGLE DEATEVAHLL AEPKSEHVSR DGVLCFGKDN  60
LEKHLKMEDF SCAFDYGWKI NYGGLDSIHG QGGDDLKLEV LDGLLDEVDE VDDIHAAHDI  120
SGACEDFLLD IEFPEKHSVL DCGPREGSTL RNSSSESHSP GFSGSSNSAG GISESSIPTV  180
QESNSKNGVL GNMVSCDLHR NFRSKYGCQG PVLDTIRPTI EDVQDLDVSD DDEEPLVSFI  240
LSNRKVKGSV KVTKGGTLLR QKRLRKPTRR YIEEFSRNST TGKNKCLKVR SQEEFPQVPS  300
KSQPRRGRPK KIVPKLELES DCEFSASESE DQHKRTKRSK TACDRRKHQT MWTLAEVIKL  360
VDGIAQYGVG RWTDIKRLLF ASSAYRTPVD LRDKWRNLLR SSSAHGHNRR ELQVQNNVKH  420
AVRPLPKPVV RRIRELATIH PYPRVRSSKI SSVDYVPSSK QPTTKVAPVY SPARNLRGKN  480
CC

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G72650.1	2e-23	MYB_related family protein