PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_022745167.1

Organism

Durio zibethinus

Taxonomic ID

66656

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Malvales; Malvaceae; Helicteroideae; Durio

Family

GATA

Protein Properties

Length: 460aa MW: 51777.1 Da PI: 9.5039

Description

GATA family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_022745167.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	GATA	52.9	5.1e-17	387	421	1	35
GATA 1 CsnCgttkTplWRrgpdgnktLCnaCGlyyrkkgl 35 C++C + Tp+WR gp g+ktLCnaCG++y++ +l XP_022745167.1 387 CTHCLAQRTPQWRAGPLGPKTLCNACGVRYKSGRL 421 *******************************9986 PP

Sequence ? help Back to Top
Protein Sequence Length: 460 aa Download sequence
MAQFTPQGRL KLLFHGDGME SKDPFHYKLV SNVFGGSGGL KSLQVHNSTT RRLYFSYSLK 60 KGSKFNAKAC LNASNEGIYD EADYDSEFET DDLACFRGLV LDSSYRPVNV VCWRRAICLE 120 FMEKVPHLLQ VVKRRRIRNN LSRKNVLFRD NFTCQYCEAD ENLTIDHVLP VARGGEWKWE 180 NLVAACAKCN SMKGQKTPDE ANMKLIKVPK EVDMSLEWLS IFVEDCFSSS GNYIPVGAAA 240 NVQNKSTTAT KPTKSLEQKP QQTPPSLQKF SVPGKARSKR KRAATTLSKT KMNPFSSWSN 300 HLNSHNPNLQ LACSDPPLLQ QAYWLAESEL IVPKKEEDDC KNSSSNLMGN SEVEQSKKEE 360 MKKEKVVVSK ESLGSEEGNS GQQPRRCTHC LAQRTPQWRA GPLGPKTLCN ACGVRYKSGR 420 LLPEYRPAKS PTFVSYLHSN SHKKVMEMRM ALLSSIPSEQ

Sequence ? help Back to Top

Protein Sequence Length: 460 aa Download sequence

MAQFTPQGRL KLLFHGDGME SKDPFHYKLV SNVFGGSGGL KSLQVHNSTT RRLYFSYSLK  60
KGSKFNAKAC LNASNEGIYD EADYDSEFET DDLACFRGLV LDSSYRPVNV VCWRRAICLE  120
FMEKVPHLLQ VVKRRRIRNN LSRKNVLFRD NFTCQYCEAD ENLTIDHVLP VARGGEWKWE  180
NLVAACAKCN SMKGQKTPDE ANMKLIKVPK EVDMSLEWLS IFVEDCFSSS GNYIPVGAAA  240
NVQNKSTTAT KPTKSLEQKP QQTPPSLQKF SVPGKARSKR KRAATTLSKT KMNPFSSWSN  300
HLNSHNPNLQ LACSDPPLLQ QAYWLAESEL IVPKKEEDDC KNSSSNLMGN SEVEQSKKEE  360
MKKEKVVVSK ESLGSEEGNS GQQPRRCTHC LAQRTPQWRA GPLGPKTLCN ACGVRYKSGR  420
LLPEYRPAKS PTFVSYLHSN SHKKVMEMRM ALLSSIPSEQ

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	133	137	KRRRI

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G32890.1	8e-39	GATA family protein