PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_022745009.1

Organism

Durio zibethinus

Taxonomic ID

66656

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Malvales; Malvaceae; Helicteroideae; Durio

Family

Trihelix

Protein Properties

Length: 475aa MW: 54063.4 Da PI: 6.5477

Description

Trihelix family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_022745009.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	trihelix	75.1	1.1e-23	108	207	1	86
trihelix 1 rWtkqevlaLiearremeerlrrgk.............lkkplWeevskkmrergferspkqCkekwenlnkrykkikegekkr.tsessstcpy 81 +Wt ++v++Li a+ +++++ +++ +kk++W++vs++m+e+gf +sp+qC++k+++lnkryk+++++ +k+ +++++++ ++ XP_022745009.1 108 KWTGSMVRLLIMAVYYIGDEAGSEGndptgkkkaggllQKKGKWKSVSRAMMEKGFYVSPQQCEDKFNDLNKRYKRVNDILGKGtACRVVENQSL 202 7************99888875433677778999999******************************************559****** PP trihelix 82 fdqle 86 +d ++ XP_022745009.1 203 LDTMD 207 *9997 PP

Sequence ? help Back to Top
Protein Sequence Length: 475 aa Download sequence
MVCLVGWFSG IGSGVLGLEM PLHPQQQPPQ NPQSAQNPHH LHHHPQMVAF SHHETDHSQH 60 QQPVKQGYTF SSKTKQPSPL SDEDEPGFTP DDGTADAKRK ISPWQRMKWT GSMVRLLIMA 120 VYYIGDEAGS EGNDPTGKKK AGGLLQKKGK WKSVSRAMME KGFYVSPQQC EDKFNDLNKR 180 YKRVNDILGK GTACRVVENQ SLLDTMDLSP KMKEEVRKLL NSKHLFFREM CAYHNSCGHG 240 ATAGPGGANH SPEVATETSQ IQQQHSQQQR CLHSSDNAQI AGNWGRIETE ASKLTKVGSE 300 EEDDEEDDDS EDDEEAMDGH SSGQNGHGQE DDEDNDEKSS LKRPRKGAFA MSLTPLMQQL 360 SCEVVNLIQD GTKNAWEKKH WMKMRLIQLE EQEVSYQYQA FELEKQRLKW VKFSSKKERE 420 MEKAKLENER RRLENERMML LVRQKELELI DLLQHHHQPQ QHSSDKRGDP SSMTG

Sequence ? help Back to Top

Protein Sequence Length: 475 aa Download sequence

MVCLVGWFSG IGSGVLGLEM PLHPQQQPPQ NPQSAQNPHH LHHHPQMVAF SHHETDHSQH  60
QQPVKQGYTF SSKTKQPSPL SDEDEPGFTP DDGTADAKRK ISPWQRMKWT GSMVRLLIMA  120
VYYIGDEAGS EGNDPTGKKK AGGLLQKKGK WKSVSRAMME KGFYVSPQQC EDKFNDLNKR  180
YKRVNDILGK GTACRVVENQ SLLDTMDLSP KMKEEVRKLL NSKHLFFREM CAYHNSCGHG  240
ATAGPGGANH SPEVATETSQ IQQQHSQQQR CLHSSDNAQI AGNWGRIETE ASKLTKVGSE  300
EEDDEEDDDS EDDEEAMDGH SSGQNGHGQE DDEDNDEKSS LKRPRKGAFA MSLTPLMQQL  360
SCEVVNLIQD GTKNAWEKKH WMKMRLIQLE EQEVSYQYQA FELEKQRLKW VKFSSKKERE  420
MEKAKLENER RRLENERMML LVRQKELELI DLLQHHHQPQ QHSSDKRGDP SSMTG

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G10040.1	7e-74	Trihelix family protein