PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_022744744.1
Organism
Durio zibethinus
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Malvales; Malvaceae; Helicteroideae; Durio
Family GATA
Protein Properties Length: 343aa    MW: 37276.8 Da    PI: 7.2364
Description GATA family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_022744744.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1GATA55.11e-17250283134
            GATA   1 CsnCgttkTplWRrgpdgnktLCnaCGlyyrkkg 34 
                     C +C  tkTp+WR gp g+ktLCnaCG++y++ +
  XP_022744744.1 250 CMHCEITKTPQWRAGPMGPKTLCNACGVRYKSGR 283
                     99*****************************987 PP
Sequence ? help Back to Top
Protein Sequence    Length: 343 aa     Download sequence    
MIGPTDFIDE IDCGSFFDHI DDLLDFPNED IEPGLSASGS AFNAAAFPGI WTAHSESFPA  60
SDSVFSNNTA PDLSAELSLP YEDIVQLEWL SNFVEDSHCG ASLTIKKEES SSINKDSSHH  120
QFQTSSPVSV LESSSSCSGD KTLPPSPETA APGRPGRARS KRPRPATFNP RPAIQLVSPT  180
SSVNENNVPQ PFVVPKVPSD SENYAESRLL IKIPRQVNPE HKKKKKIKLS LSAAPAYNTQ  240
NPSGQAVRKC MHCEITKTPQ WRAGPMGPKT LCNACGVRYK SGRLFPEYRP AASPTFVPSL  300
HSNSHKKVIE MRTKSSAAPT TTMVTTNSPE LIPNKTNPAL DYI
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
1161165KRPRP
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G54810.21e-43GATA family protein